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bjp_ig3402_sc_2385_11_26_36

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Displaying items 1-30 of 665 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_sc_2385_11_26_36_1
Vibrio campbellii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(345..626)
DNA (282bp) protein (94aa)
transposase Tax=Algicola sagamiensis RepID=UPI0003684550
transposase
Uncharacterized protein {ECO:0000313|EMBL:ABU70636.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio campbellii (strain ATCC BAA-1116 / BB120).;"
bjp_ig3402_sc_2385_11_26_36_2
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

717..1568
DNA (852bp) protein (284aa)
hypothetical protein, partial Tax=actinobacterium SCGC AAA278-O22 RepID=UPI00037B88C4
protein kinase
Tax=RBG_16_Actinobacteria_70_17_curated
bjp_ig3402_sc_2385_11_26_36_3
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

1650..1916
DNA (267bp) protein (89aa)
IS3 family transposase orfA Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F2F0_ACIC5
IS3 family transposase orfA
IS3 family transposase orfA {ECO:0000313|EMBL:ACO31337.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
bjp_ig3402_sc_2385_11_26_36_4
Ralstonia sp. A12, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1958..2743
DNA (786bp) protein (262aa)
Integrase Tax=Ralstonia sp. AU12-08 RepID=S9RQ11_9RALS
Uncharacterized protein {ECO:0000313|EMBL:KHK49100.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. A12.;"
putative ISRSO14-transposase orfB protein
bjp_ig3402_sc_2385_11_26_36_5
unknown

Not on your lists

comp(2974..3333)
DNA (360bp) protein (120aa)

This feature has no annotations

bjp_ig3402_sc_2385_11_26_36_6
RLO_PLX_64_10, Bacteria

Not on your lists

comp(3336..3941)
DNA (606bp) protein (202aa)
YceI family protein Tax=Caldithrix abyssi DSM 13497 RepID=H1XVV1_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
bjp_ig3402_sc_2385_11_26_36_7
unknown

Not on your lists

comp(3978..4742)
DNA (765bp) protein (255aa)

This feature has no annotations

bjp_ig3402_sc_2385_11_26_36_8
Shewanella baltica, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4729..5610)
DNA (882bp) protein (294aa)
UPF0276 protein Sbal175_1068 Tax=Shewanella baltica RepID=G0AZZ3_9GAMM
hypothetical protein
UPF0276 protein Sbal175_1068 {ECO:0000256|HAMAP-Rule:MF_00697}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella baltica BA175.;"
bjp_ig3402_sc_2385_11_26_36_9
unknown

Not on your lists

comp(5673..5996)
DNA (324bp) protein (108aa)

This feature has no annotations

bjp_ig3402_sc_2385_11_26_36_10
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(6082..6876)
DNA (795bp) protein (265aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037668F3
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
bjp_ig3402_sc_2385_11_26_36_11
unknown

Not on your lists

comp(6907..7695)
DNA (789bp) protein (263aa)

This feature has no annotations

bjp_ig3402_sc_2385_11_26_36_12
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(7682..8305)
DNA (624bp) protein (208aa)
RNA polymerase, sigma-24 subunit, RpoE Tax=Chthonomonas calidirosea T49 RepID=S0EVJ3_9BACT
RNA polymerase, sigma-24 subunit, RpoE
RNA polymerase, sigma-24 subunit, RpoE {ECO:0000313|EMBL:CCW35816.1}; species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
bjp_ig3402_sc_2385_11_26_36_13
RIFOXYA2_FULL_RIF01_40_8_curated, RIF1, Bacteria

Not on your lists

comp(8322..8945)
DNA (624bp) protein (208aa)
Peptide methionine sulfoxide reductase MsrA Tax=Lawsonia intracellularis RepID=M1GG30_LAWIN
msrA; peptide methionine sulfoxide reductase A
Tax=RIFOXYA2_FULL_RIF01_40_8_curated
bjp_ig3402_sc_2385_11_26_36_14
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(9034..9927)
DNA (894bp) protein (298aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; Flags: Precursor;; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" source="Chloroherpeton thalassium (strain ATCC 35110 / GB-78).;"
Peptide methionine sulfoxide reductase MsrB Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QUR6_CHLT3
methionine-R-sulfoxide reductase
bjp_ig3402_sc_2385_11_26_36_15
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9978..10397)
DNA (420bp) protein (140aa)
msrA_msrB; bifunctional methionine sulfoxide reductase B/A protein (EC:1.8.4.11)
Peptide methionine sulfoxide reductase Tax=Coxiella burnetii RepID=A9KGA4_COXBN
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
bjp_ig3402_sc_2385_11_26_36_16
Polynucleobacter necessarius, Polynucleobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10599..11186)
DNA (588bp) protein (196aa)
Uracil-DNA glycosylase superfamily Tax=Polynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1) RepID=A4T0K5_POLSQ
uracil-DNA glycosylase
Uracil-DNA glycosylase superfamily {ECO:0000313|EMBL:ABP35269.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter.;" source="Polynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 /; CIP 109841 / QLW-P1DMWA-1).;"
bjp_ig3402_sc_2385_11_26_36_17
Legionella pneumophila, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11300..11854)
DNA (555bp) protein (185aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 /; ATCC 33152 / DSM 7513).;"
24 kDa macrophage-induced major protein Tax=Legionella pneumophila RepID=G8UVH3_LEGPN
Macrophage infectivity potentiator-related protein
bjp_ig3402_sc_2385_11_26_36_18
gamma proteobacterium IMCC2047, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11969..12538
DNA (570bp) protein (190aa)
Transcriptional regulator2C TetR family Tax=gamma proteobacterium IMCC2047 RepID=F3KDM6_9GAMM
Transcriptional regulator2C TetR family {ECO:0000313|EMBL:EGG99528.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium IMCC2047.;"
TetR family transcriptional regulator
bjp_ig3402_sc_2385_11_26_36_19
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12535..13200
DNA (666bp) protein (222aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4Y2U4_SORCE
Serine/threonine protein kinase {ECO:0000313|EMBL:AKF04842.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
bjp_ig3402_sc_2385_11_26_36_20
Denitrovibrio acetiphilus, Denitrovibrio, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

comp(13197..14015)
DNA (819bp) protein (273aa)
Integrase catalytic region Tax=Denitrovibrio acetiphilus (strain DSM 12809 / N2460) RepID=D4H574_DENA2
integrase catalytic subunit
Integrase catalytic region {ECO:0000313|EMBL:ADD69430.1}; species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae; Denitrovibrio.;" source="Denitrovibrio acetiphilus (strain DSM 12809 / N2460).;"
bjp_ig3402_sc_2385_11_26_36_21
Vibrio campbellii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14153..14434)
DNA (282bp) protein (94aa)
transposase Tax=Algicola sagamiensis RepID=UPI0003684550
transposase
Uncharacterized protein {ECO:0000313|EMBL:ABU70636.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio campbellii (strain ATCC BAA-1116 / BB120).;"
bjp_ig3402_sc_2385_11_26_36_22
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14519..14905
DNA (387bp) protein (129aa)
Pathogenesis related protein Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MDT2_PSEPS
Pathogenesis related protein {ECO:0000313|EMBL:ELS26122.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes KF707.;"
hypothetical protein
bjp_ig3402_sc_2385_11_26_36_23
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14905..16824
DNA (1920bp) protein (640aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
Pathogenesis-related protein Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6B8Q0_RHILS
pathogenesis-related protein
bjp_ig3402_sc_2385_11_26_36_24
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16827..17336)
DNA (510bp) protein (170aa)
hypothetical protein Tax=Cupriavidus sp. UYPR2.512 RepID=UPI000366AAFD
Methionyl-tRNA formyltransferase-like protein {ECO:0000313|EMBL:EJC65638.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis subsp. faecalis NCIB 8687.;"
methionyl-tRNA formyltransferase-like protein
bjp_ig3402_sc_2385_11_26_36_25
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17396..18292)
DNA (897bp) protein (299aa)
Retron-type RNA-directed DNA polymerase (EC:2.7.7.49)
Uncharacterized protein Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TP23_METAC
Uncharacterized protein {ECO:0000313|EMBL:KKH61756.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Methanosarcina frisia).;"
bjp_ig3402_sc_2385_11_26_36_26
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18470..19273)
DNA (804bp) protein (268aa)
Uncharacterized protein Tax=Veillonella sp. CAG:933 RepID=R5BXI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX57377.1}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
hypothetical protein
bjp_ig3402_sc_2385_11_26_36_27
unknown

Not on your lists

19445..19714
DNA (270bp) protein (90aa)

This feature has no annotations

bjp_ig3402_sc_2385_11_26_36_28
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19627..20583)
DNA (957bp) protein (319aa)
RES domain-containing protein Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5RQS6_RHIET
RES domain-containing protein
RES domain-containing protein {ECO:0000313|EMBL:AGS20108.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
bjp_ig3402_sc_2385_11_26_36_29
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20646..21635)
DNA (990bp) protein (330aa)
Site-specific recombinase XerD Tax=Thiorhodovibrio sp. 970 RepID=H8Z7C4_9GAMM
Site-specific recombinase XerD {ECO:0000313|EMBL:EIC19840.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 970.;"
putative integrase
bjp_ig3402_sc_2385_11_26_36_30
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22478..22861)
DNA (384bp) protein (128aa)
Uncharacterized protein Tax=Caulobacter crescentus OR37 RepID=R0EMD6_CAUCE
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
Displaying items 1-30 of 665 in total

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