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bjp_ig3402_scaffold_2119

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_2119_trna_1
unknown

Not on your lists

comp(6..78)
DNA (73bp)
transferRNA
bjp_ig3402_scaffold_2119_1
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(88..765)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z1S1_9BACT
Uncharacterized protein Tax=RBG_13_RIF_OD1_08_37_53_curated
bjp_ig3402_scaffold_2119_2
Chelonia mydas, Chelonia, Testudines, Chordata, Metazoa

Not on your lists

comp(915..1886)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Chelonia mydas RepID=M7BXW7_CHEMY
Uncharacterized protein {ECO:0000313|EMBL:EMP42701.1}; TaxID=8469 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudines; Cryptodira; Durocryptodira; Amer
hypothetical protein LOC687472
bjp_ig3402_scaffold_2119_3
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(1920..3428)
DNA (1509bp) protein (503aa)
Uncharacterized protein Tax=RBG_13_RIF_OD1_08_37_53_curated
bjp_ig3402_scaffold_2119_4
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(3433..3705)
DNA (273bp) protein (91aa)
Tax=RBG_13_RIF_OD1_08_37_53_curated
bjp_ig3402_scaffold_2119_5
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(3692..4237)
DNA (546bp) protein (182aa)
Tax=RBG_13_RIF_OD1_08_37_53_curated
bjp_ig3402_scaffold_2119_6
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(4264..4863)
DNA (600bp) protein (200aa)
coiled-coil 75..96 id=4575 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
Tax=RBG_13_RIF_OD1_08_37_53_curated
bjp_ig3402_scaffold_2119_7
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(4811..5947)
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003795D65
type IV pilus assembly protein PilM Tax=RBG_13_RIF_OD1_08_37_53_curated
hypothetical protein
bjp_ig3402_scaffold_2119_8
RIFOXYB1_FULL_RIF_OD1_07_40_15_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(5961..7244)
DNA (1284bp) protein (428aa)
id=3486137 Tax=RIFOXYB1_FULL_RIF_OD1_07_40_15_curated
id=3486137 bin=GWA1_ZB2_49_26 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
bjp_ig3402_scaffold_2119_9
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(7247..7756)
DNA (510bp) protein (170aa)
id=3486136 Tax=RBG_13_RIF_OD1_08_37_53_curated
id=3486136 bin=GWA1_ZB2_49_26 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
bjp_ig3402_scaffold_2119_10
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(7763..8266)
DNA (504bp) protein (168aa)
id=3486135 Tax=RBG_13_RIF_OD1_08_37_53_curated
id=2824648 bin=GWC1_OD1_38_17 species=ACD24 genus=ACD24 taxon_order=ACD24 taxon_class=ACD24 phylum=WWE3 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
bjp_ig3402_scaffold_2119_11
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(8238..9104)
DNA (867bp) protein (289aa)
id=3486134 Tax=RBG_13_RIF_OD1_08_37_53_curated
id=3486134 bin=GWA1_ZB2_49_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
bjp_ig3402_scaffold_2119_12
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(9101..10327)
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037114F0
type II secretion system F domain-containing protein; K02653 type IV pilus assembly protein PilC Tax=RBG_13_RIF_OD1_08_37_53_curated
Type II secretion system protein
bjp_ig3402_scaffold_2119_13
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(10332..12065)
DNA (1734bp) protein (578aa)
Type II secretion system protein E Tax=RBG_13_RIF_OD1_08_37_53_curated
Type II secretion system protein E id=2824642 bin=GWC1_OD1_38_17 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation rbh
secretion system protein E
bjp_ig3402_scaffold_2119_14

Not on your lists

comp(12118..12486)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035E4390
Adenylate cyclase {ECO:0000313|EMBL:KKR04151.1}; TaxID=1618962 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_39_13b.;"
two-component system response regulatory protein
bjp_ig3402_scaffold_2119_15
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(12540..13499)
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003804C61
multi-sensor signal transduction histidine kinase Tax=RBG_13_RIF_OD1_08_37_53_curated
hypothetical protein
Displaying 16 items

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