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bjp_ig3402_scaffold_333

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_333_1
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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1..810
DNA (810bp) protein (270aa)
nuoD; NADH dehydrogenase I subunit D; K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] Tax=GWA2_Ignavibacteria_54_16_curated
NADH-quinone oxidoreductase subunit D id=3924780 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
nuoD; NADH dehydrogenase I subunit D
bjp_ig3402_scaffold_333_2
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

833..1297
DNA (465bp) protein (155aa)
nuoE; NADH-quinone oxidoreductase subunit E (EC:1.6.99.5)
NADH dehydrogenase subunit E Tax=GWA2_Ignavibacteria_54_16_curated
NADH dehydrogenase subunit E id=4534609 bin=GWA2_Ignavibacteria-rel_35_8 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
bjp_ig3402_scaffold_333_3
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

1302..2594
DNA (1293bp) protein (431aa)
NADH dehydrogenase subunit F n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZN55_MELRP
NADH dehydrogenase subunit F Tax=GWA2_Ignavibacteria_54_16_curated
NADH dehydrogenase subunit F
bjp_ig3402_scaffold_333_4
unknown

Not on your lists

2644..2820
DNA (177bp) protein (59aa)

This feature has no annotations

bjp_ig3402_scaffold_333_5
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(3083..3484)
DNA (402bp) protein (134aa)
hypothetical protein Tax=GWA2_Ignavibacteria_54_16_curated
Uncharacterized protein id=5017185 bin=GWA2_Ignavibacteria_55_11 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
bjp_ig3402_scaffold_333_trna_1
unknown

Not on your lists

3596..3668
DNA (73bp)
transferRNA
bjp_ig3402_scaffold_333_6
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

Not on your lists

4084..4833
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI000364975E
hypothetical protein Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
bjp_ig3402_scaffold_333_7
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

4986..6725
DNA (1740bp) protein (580aa)
hypothetical protein Tax=CG_Ignavi_02
Uncharacterized protein id=3948691 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
hypothetical protein
bjp_ig3402_scaffold_333_8
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

6728..7447
DNA (720bp) protein (240aa)
Fe-S oxidoreductase n=1 Tax=Desulfospira joergensenii RepID=UPI0003B786F0
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
hypothetical protein
bjp_ig3402_scaffold_333_9
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

Not on your lists

7475..8875
DNA (1401bp) protein (467aa)
Iron-sulfur cluster binding protein n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L3W8_9BACI
Iron-sulfur cluster binding protein Tax=RBG_13_RIF03_48_7_curated
iron-sulfur cluster binding protein
bjp_ig3402_scaffold_333_10
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8872..9444
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Zymophilus raffinosivorans RepID=UPI0003778292
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG61536.1}; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ruminis (stra
bjp_ig3402_scaffold_333_11
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9476..10792
DNA (1317bp) protein (439aa)
UDP-glucose/GDP-mannose dehydrogenase; K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=CG_Desulfob_01
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XXK5_9BACT rbh
bjp_ig3402_scaffold_333_12
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

10782..11735
DNA (954bp) protein (318aa)
NAD-dependent epimerase/dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
NAD-dependent epimerase/dehydratase id=1714681 bin=GWB2_Ignavibacteria_35_12 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good rbh
dTDP-glucose 4,6-dehydratase
bjp_ig3402_scaffold_333_13
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

11732..12691
DNA (960bp) protein (320aa)
Putative uncharacterized protein id=4178379 bin=GWF2_Ignavibacteria_35_20 species=Fibrobacter succinogenes genus=Fibrobacter taxon_order=Fibrobacterales taxon_class=Fibrobacteria phylum=Fibrobacteres tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
hypothetical protein
bjp_ig3402_scaffold_333_14
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

12691..14388
DNA (1698bp) protein (566aa)
hypothetical protein Tax=CG_Ignavi_02
Uncharacterized protein id=4419583 bin=GWF2_Ignavibacteria_35_20 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria rbh
hypothetical protein
bjp_ig3402_scaffold_333_15

Not on your lists

14475..14696
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon JGI 0000001-H6 RepID=UPI000375EB43
Peroxiredoxin {ECO:0000313|EMBL:EQD27388.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
peroxiredoxin
bjp_ig3402_scaffold_333_16
Leptotrichia goodfellowii, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

14689..15162
DNA (474bp) protein (158aa)
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EEY34664.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EEY34664.1};; TaxID=596323 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;
Antioxidant, AhpC/TSA family n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GML6_9FUSO
peroxiredoxin
bjp_ig3402_scaffold_333_17
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

15186..15449
DNA (264bp) protein (88aa)
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15] Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
Alkyl hydroperoxide reductase n=1 Tax=Aquifex aeolicus (strain VF5) RepID=O66779_AQUAE
ahpC1; alkyl hydroperoxide reductase
bjp_ig3402_scaffold_333_18
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

15461..15871
DNA (411bp) protein (137aa)
6-pyruvoyl tetrahydrobiopterin synthase {ECO:0000313|EMBL:CCQ91968.1}; EC=4.2.3.12 {ECO:0000313|EMBL:CCQ91968.1};; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinac
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YN83_9BACT
6-pyruvoyltetrahydropterin synthase (6-pyruvoyl tetrahydrobiopterin) synthase
bjp_ig3402_scaffold_333_19
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

15871..16449
DNA (579bp) protein (193aa)
GTP cyclohydrolase 1 n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6YXA0_MELRP
GTP cyclohydrolase I
Tax=BJP_IG2102_Ignavibacteriales_35_8
bjp_ig3402_scaffold_333_20
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

16449..17180
DNA (732bp) protein (244aa)
Dehydrogenase id=3949881 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
dehydrogenase Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
dehydrogenase
bjp_ig3402_scaffold_333_21
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

17177..17881
DNA (705bp) protein (235aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XRK3_9BACT
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EHO40156.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
fabG; 3-ketoacyl-ACP reductase
bjp_ig3402_scaffold_333_22
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(18082..18726)
DNA (645bp) protein (215aa)
Uncharacterized protein id=2680713 bin=GWA2_Ignavibacteria_55_11 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein Tax=GWC2_Ignavibacteria_rel_36_12_curated
P pilus assembly/Cpx signaling pathway periplasmic inhibitor/zinc-resistance associated protein
bjp_ig3402_scaffold_333_23
unknown

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18827..19204
DNA (378bp) protein (126aa)

This feature has no annotations

bjp_ig3402_scaffold_333_24
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

19277..21463
DNA (2187bp) protein (729aa)
TPR repeat-containing protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZX88_MELRP
hypothetical protein Tax=RBG_16_Ignavibacteria_34_14_curated
TPR repeat-containing protein
bjp_ig3402_scaffold_333_25
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

21479..22243
DNA (765bp) protein (255aa)
Dihydroorotate dehydrogenase electron transfer subunit id=4807346 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
Dihydroorotate dehydrogenase electron transfer subunit Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
pyrDII; dihydroorotate dehydrogenase electron transfer subunit
bjp_ig3402_scaffold_333_26
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

22244..23185
DNA (942bp) protein (314aa)
Dihydroorotate dehydrogenase id=5024377 bin=GWA2_Ignavibacteria_55_11 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
dihydroorotate dehydrogenase, catalytic subunit Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
dihydroorotate dehydrogenase, catalytic subunit
bjp_ig3402_scaffold_333_27
RBG_16_Zixibacteria_40_9_curated, Zixibacteria, Bacteria

Not on your lists

23176..24477
DNA (1302bp) protein (434aa)
bifunctional folylpolyglutamate synthase/dihydrofolate synthase; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] Tax=RBG_16_Zixibacteria_40_9_curated
Putative uncharacterized protein id=1251108 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
FolC; folylpolyglutamate synthase
bjp_ig3402_scaffold_333_28
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

24678..25931
DNA (1254bp) protein (418aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=945713 specie
Transcription termination factor Rho id=4874593 bin=GWC2_Ignavibacteria_56_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
rho; transcription termination factor Rho
bjp_ig3402_scaffold_333_29
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

26262..27437
DNA (1176bp) protein (392aa)
Acetyl-CoA acetyltransferase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XNS7_9BACT rbh
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EHO39867.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
atoB; acetyl-CoA C-acetyltransferase
Displaying items 1-30 of 45 in total

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