ggKbase home page

bjp_ig3402_scaffold_3293

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_3293_1
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1..201
DNA (201bp) protein (67aa)
id=1969486 bin=GWE2_Bacteroidetes_42_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
hypothetical protein Tax=GWF2_Bacteroidetes_43_11_curated
bjp_ig3402_scaffold_3293_2
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

324..1643
DNA (1320bp) protein (440aa)
pepP; proline aminopeptidase P II (EC:3.4.11.9); K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] Tax=GWF2_Bacteroidetes_43_11_curated
Xaa-proline aminopeptidase id=1969485 bin=GWE2_Bacteroidetes_42_24 species=Proteus mirabilis genus=Proteus taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes rbh
peptidase M24
bjp_ig3402_scaffold_3293_3
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

comp(1915..2598)
DNA (684bp) protein (228aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine
7-cyano-7-deazaguanine synthase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XNE8_9BACT rbh
queC; Queuosine biosynthesis protein QueC
bjp_ig3402_scaffold_3293_4
unknown

Not on your lists

2683..3087
DNA (405bp) protein (135aa)

This feature has no annotations

bjp_ig3402_scaffold_3293_5
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(2981..3661)
DNA (681bp) protein (227aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis prote
7-carboxy-7-deazaguanine synthase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z3S4_MELRP
radical-activating enzyme, radical SAM superfamily
bjp_ig3402_scaffold_3293_trna_1
unknown

Not on your lists

comp(3810..3883)
DNA (74bp)
transferRNA
bjp_ig3402_scaffold_3293_6
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

4073..4519
DNA (447bp) protein (149aa)
Uncharacterized protein id=1827663 bin=GWA2_Ignavibacteria_55_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
hypothetical protein
bjp_ig3402_scaffold_3293_7
Siansivirga zeaxanthinifaciens, Siansivirga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4734..5999)
DNA (1266bp) protein (422aa)
Membrane dipeptidase n=1 Tax=Niabella soli DSM 19437 RepID=H1NN66_9SPHI
dipeptidase
Dipeptidase {ECO:0000313|EMBL:AJR03371.1}; TaxID=1454006 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Siansivirga.;" source="Siansivirga zeaxanthinifaciens CC
bjp_ig3402_scaffold_3293_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6019..6228)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJZ0_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY48798.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
bjp_ig3402_scaffold_3293_9
unknown

Not on your lists

comp(6351..7520)
DNA (1170bp) protein (390aa)

This feature has no annotations

bjp_ig3402_scaffold_3293_10
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(7520..8626)
DNA (1107bp) protein (369aa)
deoxyhypusine synthase-like protein; K00809 deoxyhypusine synthase [EC:2.5.1.46] Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Deoxyhypusine synthase id=4940712 bin=GWC2_Ignavibacteria_56_12 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
deoxyhypusine synthase-like protein
bjp_ig3402_scaffold_3293_11
unknown

Not on your lists

comp(8768..8896)
DNA (129bp) protein (43aa)

This feature has no annotations

bjp_ig3402_scaffold_3293_12

Not on your lists

comp(8865..9623)
DNA (759bp) protein (253aa)
hypothetical protein n=2 Tax=Aminicenantes RepID=UPI000379792A
Marine sediment metagenome DNA, contig: S03H2_L00045 {ECO:0000313|EMBL:GAH26846.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
fabG; short-chain alcohol dehydrogenase
bjp_ig3402_scaffold_3293_13
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10127..10927
DNA (801bp) protein (267aa)
CAAX amino terminal protease family n=1 Tax=Novosphingobium sp. AP12 RepID=J2GWZ0_9SPHN
CAAX amino terminal protease family {ECO:0000313|EMBL:EJL27468.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosph
CAAX amino terminal protease family
bjp_ig3402_scaffold_3293_14
Palaeococcus pacificus, Palaeococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

11106..11444
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DEL8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF68490.1}; TaxID=1343739 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Palaeococcus.;" source="Palaeococcus pacificus DY203
bjp_ig3402_scaffold_3293_15
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

11601..11882
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CM53_DESK7
hypothetical protein Tax=CG_Dehalo_02
hypothetical protein
bjp_ig3402_scaffold_3293_16

Not on your lists

11903..12679
DNA (777bp) protein (259aa)
DNA alkylation repair enzyme n=1 Tax=uncultured archaeon GZfos12E1 RepID=Q5Y0L2_9ARCH
DNA alkylation repair enzyme {ECO:0000313|EMBL:CEG11974.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
putative DNA alkylation repair enzyme
bjp_ig3402_scaffold_3293_17
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

12700..13116
DNA (417bp) protein (139aa)
hypothetical protein Tax=RBG_16_Chloroflexi_56_8_curated
id=2599472 bin=GWF1_Spirochaetes_51_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
bjp_ig3402_scaffold_3293_18
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

13125..13709
DNA (585bp) protein (195aa)
hypothetical protein id=24523190 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate rbh
hypothetical protein Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
hypothetical protein
bjp_ig3402_scaffold_3293_19
unknown

Not on your lists

13715..14131
DNA (417bp) protein (139aa)

This feature has no annotations

bjp_ig3402_scaffold_3293_20
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14155..14550
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2F65D
hypothetical protein
Tax=BJP_IG2069_Syntrophobacterales_47_18
Displaying 21 items

View Taxonomy