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bjp_ig3402_scaffold_2243

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_2243_1
unknown

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13..369
DNA (357bp) protein (119aa)

This feature has no annotations

bjp_ig3402_scaffold_2243_2
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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382..750
DNA (369bp) protein (123aa)
Anti-sigma factor antagonist n=1 Tax=Janibacter sp. HTCC2649 RepID=A3THY3_9MICO
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=313589 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649.;"
anti-sigma factor antagonist
bjp_ig3402_scaffold_2243_3
R_Berkelbacteria_36_9, Berkelbacteria, Bacteria

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1055..2275
DNA (1221bp) protein (407aa)
DNA-directed DNA polymerase (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7] id=86709 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58 rbh
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA-directed DNA polymerase Tax=RIFCSPHIGHO2_12_FULL_Berkelbacteria_36_9_curated
bjp_ig3402_scaffold_2243_4

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2332..4362
DNA (2031bp) protein (677aa)
WD-domain containing protein n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1PZQ7_METMZ
Uncharacterized protein {ECO:0000313|EMBL:KKM18402.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
bjp_ig3402_scaffold_2243_5

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4620..6377
DNA (1758bp) protein (586aa)
RNA polymerase factor sigma-70 n=2 Tax=Clostridium acetobutylicum RepID=F0K7J3_CLOAE
RNA polymerase factor sigma-70
RNA polymerase sigma-30 factor (Sigma(H)) {ECO:0000313|EMBL:CBH76512.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
bjp_ig3402_scaffold_2243_6

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7059..8582
DNA (1524bp) protein (508aa)
UniRef90_UPI00016B25AF hypothetical protein cdiviTM7_00321 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B25AF id=87060 bin=ACD58 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD56975.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
bjp_ig3402_scaffold_2243_7

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8614..11358
DNA (2745bp) protein (915aa)
hypothetical protein id=86677 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD57097.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
bjp_ig3402_scaffold_2243_trna_1
unknown

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comp(11732..11806)
DNA (75bp)
transferRNA
bjp_ig3402_scaffold_2243_8

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comp(11810..12352)
DNA (543bp) protein (181aa)
coiled-coil 100..128 id=87054 bin=ACD58 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Uncharacterized protein {ECO:0000313|EMBL:EKD56979.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
bjp_ig3402_scaffold_2243_9
CG_Berkel_02, Berkelbacteria, Bacteria

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12545..14233
DNA (1689bp) protein (563aa)
type IV-A pilus assembly ATPase PilB; K02652 type IV pilus assembly protein PilB Tax=CG_Berkel_02
aar:Acear_1774 type II secretion system protein E (GspE); K02652 type IV pilus assembly protein PilB id=3094 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
type IV pilus assembly protein PilB
bjp_ig3402_scaffold_2243_10
R_RIF_OP11_03_50_28, RIF-OP11-3, Microgenomates, Bacteria

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14249..15481
DNA (1233bp) protein (411aa)
type II secretion system protein; K02653 type IV pilus assembly protein PilC Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_50_28_curated
PulF protein id=3787216 bin=GWB1_Berkelbacteria_38_5 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
hypothetical protein
bjp_ig3402_scaffold_2243_11

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15535..16128
DNA (594bp) protein (198aa)
transmembrane_regions 15..34 id=72732 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:EKD64583.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
bjp_ig3402_scaffold_2243_12

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16272..18206
DNA (1935bp) protein (645aa)
transmembrane_regions 12..34 id=86743 bin=ACD58 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Uncharacterized protein {ECO:0000313|EMBL:EKD56482.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
bjp_ig3402_scaffold_2243_13

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18422..18910
DNA (489bp) protein (163aa)
transmembrane_regions 20..42 id=86745 bin=ACD58 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Uncharacterized protein {ECO:0000313|EMBL:EKD56483.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
bjp_ig3402_scaffold_2243_14

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19068..19475
DNA (408bp) protein (136aa)
hypothetical protein id=86742 bin=ACD58 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Uncharacterized protein {ECO:0000313|EMBL:EKD56484.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
bjp_ig3402_scaffold_2243_15

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20188..20787
DNA (600bp) protein (200aa)
type IV pilus assembly family protein; K02662 type IV pilus assembly protein PilM id=86747 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Uncharacterized protein {ECO:0000313|EMBL:EKD56485.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
bjp_ig3402_scaffold_2243_16

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20774..21331
DNA (558bp) protein (186aa)
coiled-coil 47..68 id=86746 bin=ACD58 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Uncharacterized protein {ECO:0000313|EMBL:EKD56486.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
bjp_ig3402_scaffold_2243_17

Not on your lists

21306..21521
DNA (216bp) protein (72aa)
transmembrane_regions 15..37 id=86744 bin=ACD58 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Uncharacterized protein {ECO:0000313|EMBL:EKD56487.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
bjp_ig3402_scaffold_2243_18

Not on your lists

21651..22082
DNA (432bp) protein (144aa)
hypothetical protein
seg 35..49 id=86748 bin=ACD58 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Uncharacterized protein {ECO:0000313|EMBL:EKD56488.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
bjp_ig3402_scaffold_2243_19
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

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comp(22174..23613)
DNA (1440bp) protein (480aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI00037BC3BF rbh
radical SAM protein Tax=Caldatribacterium californiense
Fe-S oxidoreductase
bjp_ig3402_scaffold_2243_20
R_Berkelbacteria_36_9, Berkelbacteria, Bacteria

Not on your lists

comp(23761..24726)
DNA (966bp) protein (322aa)
nuclease precursor (EC:3.1.31.1); K01174 micrococcal nuclease [EC:3.1.31.1] Tax=RIFCSPHIGHO2_12_FULL_Berkelbacteria_36_9_curated
nuclease precursor (EC:3.1.31.1)
Micrococcal nuclease-like protein id=5024929 bin=GWA2_CPR4_42_17 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
Displaying 21 items

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