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bjp_ig3402_scaffold_8238

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_8238_trna_1
unknown

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comp(97..169)
DNA (73bp)
transferRNA
bjp_ig3402_scaffold_8238_1
RLO_OD1_41_13, Parcubacteria, Bacteria

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279..539
DNA (261bp) protein (87aa)
HTH ArsR-type DNA-binding domain Tax=RIFCSPLOWO2_12_FULL_OD1_41_13_curated
HTH ArsR-type DNA-binding domain id=5801689 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
bjp_ig3402_scaffold_8238_2
R_Berkelbacteria_36_9, Berkelbacteria, Bacteria

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576..1379
DNA (804bp) protein (268aa)
seg 20..40 Tax=RIFCSPHIGHO2_12_FULL_Berkelbacteria_36_9_curated
seg 20..40 id=86186 bin=ACD58 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
bjp_ig3402_scaffold_8238_3

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1510..2535
DNA (1026bp) protein (342aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=77133 species="Bacteria; environmental samples.;" source="unc
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=uncultured bacterium RepID=K2AJ42_9BACT rbh
Holliday junction DNA helicase RuvB
bjp_ig3402_scaffold_8238_4

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2536..2748
DNA (213bp) protein (71aa)
seg 2..22 id=87233 bin=ACD58 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Uncharacterized protein {ECO:0000313|EMBL:EKD56437.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
bjp_ig3402_scaffold_8238_5

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2741..3475
DNA (735bp) protein (245aa)
transmembrane_regions 70..92 id=87235 bin=ACD58 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Uncharacterized protein {ECO:0000313|EMBL:EKD56436.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
bjp_ig3402_scaffold_8238_6
CG_Kuenen_03, Kuenenbacteria, Parcubacteria, Bacteria

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3472..3888
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI0003812437
hypothetical protein Tax=CG_Kuenen_03
hypothetical protein
bjp_ig3402_scaffold_8238_7
R_Berkelbacteria_36_9, Berkelbacteria, Bacteria

Not on your lists

3954..4817
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FDB9_9BACT
Uncharacterized protein Tax=RIFCSPHIGHO2_12_FULL_Berkelbacteria_36_9_curated
bjp_ig3402_scaffold_8238_8
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

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5688..6542
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034532D0
hypothetical protein Tax=RBG_13_RIF03_48_7_curated
hypothetical protein
bjp_ig3402_scaffold_8238_9
R_OP11_Curtissbacteria_41_44, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

6623..7279
DNA (657bp) protein (219aa)
SOS-response transcriptional repressor, LexA (EC:3.4.21.88)
LexA repressor n=1 Tax=uncultured bacterium RepID=K2AIL1_9BACT
SOS regulatory protein LexA Tax=RIFCSPHIGHO2_01_FULL_OP11_Curtissbacteria_41_44_curated
bjp_ig3402_scaffold_8238_10
R_RIF_OP11_03_48_12, RIF-OP11-3, Microgenomates, Bacteria

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7276..8634
DNA (1359bp) protein (453aa)
N-6 DNA methylase Tax=RIFCSPHIGHO2_01_FULL_RIF_OP11_03_48_12_curated
N-6 DNA methylase id=15191803 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
N-6 DNA Methylase family protein
bjp_ig3402_scaffold_8238_11
GWA2_OD1_39_24, Falkowbacteria, Parcubacteria, Bacteria

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8595..9101
DNA (507bp) protein (169aa)
Type I Restriction Enzyme Tax=GWA2_OD1_39_24
N-6 DNA methylase id=15191803 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
N-6 DNA methylase
bjp_ig3402_scaffold_8238_12
BJP_IG2102_Elusimicrobia_52_42, Elusimicrobia lineage II, Elusimicrobia, Bacteria

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9253..9927
DNA (675bp) protein (225aa)
Putative uncharacterized protein id=4889281 bin=GWC2_OP3-like_45_7 species=ACD40 genus=ACD40 taxon_order=ACD40 taxon_class=ACD40 phylum=OP11 tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
type I restriction modification DNA specificity domain protein
Tax=BJP_IG2102_Elusimicrobia_52_42
Displaying 13 items

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