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bjp_ig3402_scaffold_1324

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Displaying items 31-50 of 50 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_1324_31

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16868..17284
DNA (417bp) protein (139aa)
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 id=86573 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
30S ribosomal protein S9 {ECO:0000256|RuleBase:RU003816}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rpsI; 30S ribosomal protein S9
bjp_ig3402_scaffold_1324_32
R_Berkelbacteria_36_9, Berkelbacteria, Bacteria

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17351..17704
DNA (354bp) protein (118aa)
Ribosome-binding factor A n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NTY2_9BACE id=86574 bin=ACD58 species=Pseudoflavonifractor capillosus genus=Pseudoflavonifractor taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
ribosome-binding factor A; K02834 ribosome-binding factor A Tax=RIFCSPHIGHO2_12_FULL_Berkelbacteria_36_9_curated
rbfA; ribosome-binding factor A
bjp_ig3402_scaffold_1324_33

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17718..18092
DNA (375bp) protein (125aa)
seg 91..101 id=86531 bin=ACD58 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Uncharacterized protein {ECO:0000313|EMBL:EKD56262.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
bjp_ig3402_scaffold_1324_34
R_Berkelbacteria_36_9, Berkelbacteria, Bacteria

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18117..18809
DNA (693bp) protein (231aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=RIFCSPHIGHO2_12_FULL_Berkelbacteria_36_9_curated
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit id=3940345 bin=GWB1_Berkelbacteria_38_5 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
bjp_ig3402_scaffold_1324_35
RBG_13_Berkelbacteria_40_8_curated, Berkelbacteria, Bacteria

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18898..21045
DNA (2148bp) protein (716aa)
phenylalanine--tRNA ligase (EC:6.1.1.20)
phenylalanyl-tRNA synthetase, beta subunit Tax=RBG_13_Berkelbacteria_40_8_curated
Phenylalanine--tRNA ligase beta subunit id=3940346 bin=GWB1_Berkelbacteria_38_5 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
bjp_ig3402_scaffold_1324_36
R_OD1_48_18, Parcubacteria, Bacteria

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21228..21815
DNA (588bp) protein (196aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_48_18_curated
hypothetical protein id=5090791 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
hypothetical protein
bjp_ig3402_scaffold_1324_37
unknown

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21921..22196
DNA (276bp) protein (92aa)

This feature has no annotations

bjp_ig3402_scaffold_1324_38
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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22529..23026
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D4H9_METSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG19219.1}; TaxID=868131 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacter
bjp_ig3402_scaffold_1324_39

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23215..23766
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AJW1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD56663.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PaaX family transcriptional regulator
bjp_ig3402_scaffold_1324_40
GWA1_OD1_37_20_partial, Nomurabacteria, Parcubacteria, Bacteria

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24055..24258
DNA (204bp) protein (68aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ32211.1}; TaxID=1618729 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA1_37_20.;"
bjp_ig3402_scaffold_1324_41
unknown

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24342..25790
DNA (1449bp) protein (483aa)

This feature has no annotations

bjp_ig3402_scaffold_1324_42
R_Berkelbacteria_36_9, Berkelbacteria, Bacteria

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25811..26299
DNA (489bp) protein (163aa)
aspartyl-tRNA synthetase (EC:6.1.1.12) Tax=RIFCSPHIGHO2_12_FULL_Berkelbacteria_36_9_curated
cau:Caur_2320 aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] id=86446 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Suspect SCG annotation. See neighboring gene [bjp_ig3402_scaffold_1324_43].
bjp_ig3402_scaffold_1324_43
R_Berkelbacteria_36_9, Berkelbacteria, Bacteria

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26310..27167
DNA (858bp) protein (286aa)
aspartyl-tRNA synthetase (EC:6.1.1.12) Tax=RIFCSPHIGHO2_12_FULL_Berkelbacteria_36_9_curated
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartyl-tRNA synthetase id=4838909 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
bjp_ig3402_scaffold_1324_44

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27349..28350
DNA (1002bp) protein (334aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] id=86445 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58 rbh
Serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein {ECO:0000313|EMBL:EKD56661.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
bjp_ig3402_scaffold_1324_45

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28449..29177
DNA (729bp) protein (243aa)
Repressor in the phenylacetic acid catabolism n=1 Tax=Bacillus sp. SG-1 RepID=A6CP16_9BACI id=86413 bin=ACD58 species=Bacillus sp. SG-1 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Repressor in the phenylacetic acid catabolism {ECO:0000313|EMBL:EKD56660.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
bjp_ig3402_scaffold_1324_46

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comp(29155..29871)
DNA (717bp) protein (239aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule
Ribonuclease 3 n=1 Tax=uncultured bacterium RepID=K2B3Y8_9BACT rbh
Ribonuclease 3
bjp_ig3402_scaffold_1324_47

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comp(29861..30355)
DNA (495bp) protein (165aa)
nusB; transcription antitermination protein NusB; K03625 N utilization substance protein B id=86443 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=77133 species="Bacteria; enviro
nitrogen utilization protein B
bjp_ig3402_scaffold_1324_48
R_Berkelbacteria_36_9, Berkelbacteria, Bacteria

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comp(30488..30664)
DNA (177bp) protein (59aa)
50S ribosomal protein L32 n=1 Tax=uncultured bacterium RepID=K2A4A8_9BACT
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 Tax=RIFCSPHIGHO2_12_FULL_Berkelbacteria_36_9_curated
50S ribosomal protein L32
bjp_ig3402_scaffold_1324_49

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comp(30678..31100)
DNA (423bp) protein (141aa)
protein of unknown function DUF177; K07040 id=86415 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Uncharacterized protein {ECO:0000313|EMBL:EKD56656.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
bjp_ig3402_scaffold_1324_50

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comp(31107..31832)
DNA (726bp) protein (242aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=77133 species="Bacteria; environm
leuS; Leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=uncultured bacterium RepID=K1ZMG4_9BACT
Displaying items 31-50 of 50 in total

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