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bjp_ig3402_scaffold_5395

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_5395_1
unknown

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288..470
DNA (183bp) protein (61aa)

This feature has no annotations

bjp_ig3402_scaffold_5395_2
RLO_OD1_Nomurabacteria_44_11, Nomurabacteria, Parcubacteria, Bacteria

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1165..2343
DNA (1179bp) protein (393aa)
id=5803402 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_44_11_curated
id=5803402 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
bjp_ig3402_scaffold_5395_3
GWF2_OD1_40_10, Parcubacteria, Bacteria

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2369..3568
DNA (1200bp) protein (400aa)
seg id=5803403 bin=OD1_GWC2_34_28 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Tax=GWF2_OD1_40_10
bjp_ig3402_scaffold_5395_4
R_RIF_OD1_09_51_11, RIF-OD1-9, Parcubacteria, Bacteria

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3602..3814
DNA (213bp) protein (71aa)
translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_09_51_11_curated
translation initiation factor IF-1 id=15189785 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
infA; translation initiation factor IF-1
bjp_ig3402_scaffold_5395_5
R_OD1_41_19, Parcubacteria, Bacteria

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3931..4314
DNA (384bp) protein (128aa)
30S ribosomal protein S13 n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00038172C2
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
30S ribosomal protein S13
bjp_ig3402_scaffold_5395_6
R_RIF_OD1_09_50_13, RIF-OD1-9, Parcubacteria, Bacteria

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4316..4750
DNA (435bp) protein (145aa)
30S ribosomal protein S11 n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI00036D75F5
rpsK; 30S ribosomal protein S11 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_09_50_13_curated
30S ribosomal protein S11
bjp_ig3402_scaffold_5395_7

Not on your lists


4756..5391
DNA (636bp) protein (212aa)
30S ribosomal protein S4 {ECO:0000313|EMBL:KKS58261.1}; TaxID=1618823 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_35.;"
30S ribosomal protein S4 id=3013123 bin=GWC1_OD1_38_17 species=Syntrophomonas wolfei genus=Syntrophomonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
30S ribosomal protein S4
bjp_ig3402_scaffold_5395_8
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

5439..6353
DNA (915bp) protein (305aa)
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] id=5803408 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha {ECO:0000313|EMBL:KKT19415.1}; TaxID=1618874 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8.;"
bjp_ig3402_scaffold_5395_9
Parcubacteria bacterium GW2011_GWD2_40_9, Parcubacteria, Bacteria

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6355..6705
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035D107D
50S ribosomal protein L17 {ECO:0000313|EMBL:KKR80700.1}; TaxID=1618943 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWD2_40_9.;"
rplQ; ribosomal protein L17
bjp_ig3402_scaffold_5395_10
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists


6710..7051
DNA (342bp) protein (114aa)
rplM; ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 id=5803410 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rplM; 50S ribosomal protein L13
bjp_ig3402_scaffold_5395_11
R_OD1_39_11, Parcubacteria, Bacteria

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7059..7475
DNA (417bp) protein (139aa)
30S ribosomal protein S9 n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035CD22E
30S ribosomal protein S9 Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
30S ribosomal protein S9
bjp_ig3402_scaffold_5395_12
R_RIF_OD1_13_47_11, RIF-OD1-13, Parcubacteria, Bacteria

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7460..8953
DNA (1494bp) protein (498aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_13_47_11_curated
Putative uncharacterized protein id=2823899 bin=GWC1_OD1_38_17 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
bjp_ig3402_scaffold_5395_13
unknown

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9150..9695
DNA (546bp) protein (182aa)

This feature has no annotations

bjp_ig3402_scaffold_5395_14

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9853..10362
DNA (510bp) protein (170aa)
Protein GrpE n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYQ9_9BACT
Protein GrpE {ECO:0000313|EMBL:KKS58254.1}; TaxID=1618823 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_35.;"
GrpE protein HSP-70 cofactor
bjp_ig3402_scaffold_5395_15
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

10364..12232
DNA (1869bp) protein (623aa)
molecular chaperone DnaK; K04043 molecular chaperone DnaK Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
Chaperone protein DnaK id=2823849 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
molecular chaperone DnaK
bjp_ig3402_scaffold_5395_16
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

12247..13323
DNA (1077bp) protein (359aa)
Chaperone protein DnaJ {ECO:0000313|EMBL:KKT20669.1}; TaxID=1618874 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8.;"
chaperone protein DnaJ; K03686 molecular chaperone DnaJ id=5803415 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
molecular chaperone DnaJ
bjp_ig3402_scaffold_5395_17

Not on your lists

13331..13828
DNA (498bp) protein (166aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT00785.1}; TaxID=1618827 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_43_17.;"
transmembrane_regions 143..160 id=56778 bin=ACD43 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=ACD43 organism_group=OD1 (Parcubacteria) organism_desc=OD1
bjp_ig3402_scaffold_5395_18
unknown

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13825..14061
DNA (237bp) protein (79aa)

This feature has no annotations

bjp_ig3402_scaffold_5395_19
unknown

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14138..14227
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 19 items

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