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bjp_ig3402_scaffold_5460

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_5460_1
R_OD1_41_19, Parcubacteria, Bacteria

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1..177
DNA (177bp) protein (59aa)
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
bjp_ig3402_scaffold_5460_2
unknown

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comp(489..677)
DNA (189bp) protein (63aa)

This feature has no annotations

bjp_ig3402_scaffold_5460_3
unknown

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comp(969..1148)
DNA (180bp) protein (60aa)

This feature has no annotations

bjp_ig3402_scaffold_5460_4
unknown

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comp(1398..1577)
DNA (180bp) protein (60aa)

This feature has no annotations

bjp_ig3402_scaffold_5460_5
GWC2_OD1_42_20, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

2507..3751
DNA (1245bp) protein (415aa)
Putative molybdenum cofactor biosynthesis protein C n=1 Tax=Lactobacillus oris PB013-T2-3 RepID=E3C8W0_9LACO
Uncharacterized protein {ECO:0000313|EMBL:KKS47272.1}; TaxID=1618756 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_42_20.;"
hypothetical protein
bjp_ig3402_scaffold_5460_6
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

3838..4461
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI000365792E
Tetratricopeptide repeat family protein Tax=GWB1_OD1_43_8
hypothetical protein
bjp_ig3402_scaffold_5460_7
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

4448..5170
DNA (723bp) protein (241aa)
hypothetical protein; K07491 putative transposase Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
Transposase id=4901177 bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
bjp_ig3402_scaffold_5460_8
R_OD1_45_11, Parcubacteria, Bacteria

Not on your lists

5167..5751
DNA (585bp) protein (195aa)
transmembrane_regions 5..24 Tax=RIFCSPLOWO2_02_FULL_OD1_45_11_curated
transmembrane_regions 5..24 id=8695 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
bjp_ig3402_scaffold_5460_9
Parcubacteria bacterium GW2011_GWD2_40_9, Parcubacteria, Bacteria

Not on your lists


5876..6385
DNA (510bp) protein (170aa)
50S ribosomal protein L10 {ECO:0000313|EMBL:KKR81693.1}; TaxID=1618943 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWD2_40_9.;"
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 id=5803311 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
50S ribosomal protein L10
bjp_ig3402_scaffold_5460_10
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

6390..6779
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI0003708049
ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
rplL; 50S ribosomal protein L7/L12
bjp_ig3402_scaffold_5460_11
Parcubacteria bacterium GW2011_GWD2_40_9, Parcubacteria, Bacteria

Not on your lists

6807..7421
DNA (615bp) protein (205aa)
putative transcriptional regulator
Polymerase subunit beta protein {ECO:0000313|EMBL:KKR81695.1}; TaxID=1618943 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWD2_40_9.;"
seg id=5803313 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
bjp_ig3402_scaffold_5460_12
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

7512..8177
DNA (666bp) protein (222aa)
small-conductance mechanosensitive ion channel Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
small-conductance mechanosensitive ion channel id=5803314 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
small-conductance mechanosensitive ion channel
bjp_ig3402_scaffold_5460_13
R_OD1_Giovannonibacteria_44_11, Giovannonibacteria, Parcubacteria, Bacteria

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8312..8611
DNA (300bp) protein (100aa)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Giovannonibacteria_44_11_curated
bjp_ig3402_scaffold_5460_14
unknown

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8613..9020
DNA (408bp) protein (136aa)

This feature has no annotations

bjp_ig3402_scaffold_5460_15
unknown

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comp(9705..9893)
DNA (189bp) protein (63aa)

This feature has no annotations

bjp_ig3402_scaffold_5460_16
R_RIF_OD1_12_48_26, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

10882..11124
DNA (243bp) protein (81aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_48_26_curated
bjp_ig3402_scaffold_5460_17
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

12316..12900
DNA (585bp) protein (195aa)
id=2722906 Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
id=2722906 bin=GWC1_OD1_38_17 species=Trebouxiophyceae sp. MX-AZ01 genus=unknown taxon_order=unknown taxon_class=Trebouxiophyceae phylum=Chlorophyta tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
bjp_ig3402_scaffold_5460_18
RIFOXYD1_FULL_OD1_48_21_curated, Parcubacteria, Bacteria

Not on your lists

13575..14279
DNA (705bp) protein (235aa)
Conserved hypothetical protein CHP02588 Tax=RIFOXYD1_FULL_OD1_48_21_curated
hypothetical protein id=2482479 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
Displaying 18 items

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