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bjp_ig3402_scaffold_2658

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_2658_1
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(24..1838)
DNA (1815bp) protein (605aa)
ATP-dependent metalloprotease FtsH; K03798 cell division protease FtsH [EC:3.4.24.-] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
ATP-dependent zinc metalloprotease FtsH id=3590936 bin=GWA2_CPR4_42_17 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
cell division protein FtsH
bjp_ig3402_scaffold_2658_2
unknown

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comp(1843..3282)
DNA (1440bp) protein (480aa)

This feature has no annotations

bjp_ig3402_scaffold_2658_3

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comp(3467..5557)
DNA (2091bp) protein (697aa)
Polyribonucleotide nucleotidyltransferase, polyribonucleotide nucleotidyltransferase {ECO:0000313|EMBL:KKS91296.1}; EC=2.7.7.8 {ECO:0000313|EMBL:KKS91296.1};; TaxID=1618909 species="Bacteria; Parcubac
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00036D677E
bjp_ig3402_scaffold_2658_4
Thermodesulfovibrio yellowstonii, Thermodesulfovibrio, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(5727..6164)
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YKZ3_THEYD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI21338.1}; TaxID=289376 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio.;" source="Thermodesulfovibrio yellowstonii (stra
bjp_ig3402_scaffold_2658_5
Thermodesulfovibrio yellowstonii, Thermodesulfovibrio, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(6127..6573)
DNA (447bp) protein (149aa)
Nucleotidyltransferase n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YKZ4_THEYD
nucleotidyltransferase
Nucleotidyltransferase {ECO:0000313|EMBL:ACI20192.1}; TaxID=289376 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio.;" source="Thermodesulfovibrio yellowstonii (strai
bjp_ig3402_scaffold_2658_6
R_OD1_Yanofskybacteria_44_17, Yanofskybacteria, Parcubacteria, Bacteria

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comp(6923..7375)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EVD5_9BACT
conserved hypothetical protein (DUF88) Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_17_curated
hypothetical protein
bjp_ig3402_scaffold_2658_7
CG_Beckwith_01, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists


comp(7656..7916)
DNA (261bp) protein (87aa)
rpsO; Ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=CG_Beckwith_01
30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 id=3208444 bin=GWC1_CPR2_39_9 species=ACD40 genus=ACD40 taxon_order=ACD40 taxon_class=ACD40 phylum=OP11 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
rpsO; 30S ribosomal protein S15
bjp_ig3402_scaffold_2658_8
RBG_13_RIF_OD1_08_40_8_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

8370..10670
DNA (2301bp) protein (767aa)
integrase family protein Tax=RBG_13_RIF_OD1_08_40_8_curated
xerC; tyrosine recombinase xerC; K03733 integrase/recombinase XerC id=5802968 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds) rbh
Tyrosine recombinase XerD
bjp_ig3402_scaffold_2658_9
CG_CPR10_02, CG_CPR10, Bacteria

Not on your lists

comp(10736..10891)
DNA (156bp) protein (52aa)
id=1899337 Tax=CG_CPR10_02
bjp_ig3402_scaffold_2658_10
RIFOXYB2_FULL_Gammaproteobacteria_38_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10973..12880)
DNA (1908bp) protein (636aa)
DNA repair protein RecO n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QVG1_ACEAZ
recO; recombination protein RecO; K03584 DNA repair protein RecO (recombination protein O) Tax=RIFOXYB2_FULL_Gammaproteobacteria_38_6_curated
DNA repair protein RecO
bjp_ig3402_scaffold_2658_11
unknown

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comp(12861..13655)
DNA (795bp) protein (265aa)

This feature has no annotations

bjp_ig3402_scaffold_2658_12
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


comp(13930..17217)
DNA (3288bp) protein (1096aa)
isoleucyl-tRNA synthetase (EC:6.1.1.5) Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
Isoleucine--tRNA ligase n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GTD4_FILAD
isoleucine--tRNA ligase
bjp_ig3402_scaffold_2658_13
RBG_13_OD1_Falkowbacteria_39_14_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(17446..18855)
DNA (1410bp) protein (470aa)
two-component sensor histidine kinase Tax=RBG_13_OD1_Falkowbacteria_39_14_curated
Two-component sensor histidine kinase id=1816788 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria) rbh
two-component sensor histidine kinase
bjp_ig3402_scaffold_2658_14
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(18836..19363)
DNA (528bp) protein (176aa)
BsaJI n=1 Tax=Geobacillus stearothermophilus RepID=E5LGC0_GEOSE
putative type II restriction enzyme Tax=CG_Omnitr_02
putative type II restriction enzyme
bjp_ig3402_scaffold_2658_15
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(19417..19617)
DNA (201bp) protein (67aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
bjp_ig3402_scaffold_2658_16
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19622..19786)
DNA (165bp) protein (55aa)
site-specific DNA methyltransferase Tax=GWA2_Bacteroidetes_30_7_curated
Displaying 16 items

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