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bjp_ig3402_scaffold_5800

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_5800_1
R_OD1_Falkowbacteria_46_11b, Falkowbacteria, Parcubacteria, Bacteria

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2..289
DNA (288bp) protein (96aa)
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_OD1_Falkowbacteria_46_11b_curated
bjp_ig3402_scaffold_5800_trna_1
unknown

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comp(344..415)
DNA (72bp)
transferRNA
bjp_ig3402_scaffold_5800_2
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists


708..1820
DNA (1113bp) protein (371aa)
glycoprotease family metalloendopeptidase (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Peptostreptococcaceae bacterium oral taxon 113 str. W5053 RepID=U2JWW1_9FIRM
DNA-binding/iron metalloprotein/AP endonuclease
bjp_ig3402_scaffold_5800_3
RIFOXYA2_FULL_RIF_OD1_01_38_24_curated, RIF-OD1-1, Parcubacteria, Bacteria

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2132..2746
DNA (615bp) protein (205aa)
Ricin B lectin n=1 Tax=uncultured bacterium RepID=K2FLF6_9BACT
hypothetical protein Tax=RIFOXYA2_FULL_RIF_OD1_01_38_24_curated
bjp_ig3402_scaffold_5800_4
RBG_13_OD1_Falkowbacteria_39_9_curated, Falkowbacteria, Parcubacteria, Bacteria

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2776..5532
DNA (2757bp) protein (919aa)
valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RBG_13_OD1_Falkowbacteria_39_9_curated
toc:Toce_0684 valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] id=16440 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
valyl-tRNA synthetase (EC:6.1.1.9)
bjp_ig3402_scaffold_5800_5
GWC1_OD1_45_14, Parcubacteria, Bacteria

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5878..6336
DNA (459bp) protein (153aa)
Small heat shock protein n=1 Tax=uncultured bacterium RepID=K2ENJ6_9BACT
Protein containing Heat shock protein Hsp20 protein Tax=GWC1_OD1_45_14
hypothetical protein
bjp_ig3402_scaffold_5800_6
GWB1_OD1_40_14, Parcubacteria, Bacteria

Not on your lists

6424..7512
DNA (1089bp) protein (363aa)
Type IV pilus assembly protein PilM, nonfunctional {ECO:0000313|EMBL:KKR45663.1}; TaxID=1618865 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_40_14.;"
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM id=15190173 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
type IV pilus assembly protein PilM
bjp_ig3402_scaffold_5800_7
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7698..8516
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AAA168-P09 RepID=UPI000366082F
Lipoprotein {ECO:0000313|EMBL:KGJ94786.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (Vibrio ps
surface protein
bjp_ig3402_scaffold_5800_8
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

8687..9484
DNA (798bp) protein (266aa)
no description Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
bjp_ig3402_scaffold_5800_9
R_SM2F11_50_11, SM2F11, Bacteria

Not on your lists

9508..11262
DNA (1755bp) protein (585aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003652C54
Type II secretion system protein E Tax=RIFCSPHIGHO2_01_FULL_SM2F11_50_11_curated
type IV pilus assembly protein PilB
bjp_ig3402_scaffold_5800_10
R_OD1_46_26, Microgenomates, Bacteria

Not on your lists

11467..12546
DNA (1080bp) protein (360aa)
twitching motility protein; K02669 twitching motility protein PilT Tax=RIFCSPLOWO2_01_FULL_OD1_46_26_curated
twitching motility protein; K02669 twitching motility protein PilT id=15190178 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
twitching motility protein
bjp_ig3402_scaffold_5800_11
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

12648..13859
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037A05CE
pilC; type 4 fimbrial assembly protein PilC; K02653 type IV pilus assembly protein PilC Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
type II secretion system protein
Displaying 12 items

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