ggKbase home page

bjp_ig3402_scaffold_5929

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_5929_1
unknown

Not on your lists

1..84
DNA (84bp) protein (28aa)

This feature has no annotations

bjp_ig3402_scaffold_5929_2
unknown

Not on your lists

141..722
DNA (582bp) protein (194aa)

This feature has no annotations

bjp_ig3402_scaffold_5929_3

Not on your lists

751..1308
DNA (558bp) protein (186aa)
YbaK/prolyl-tRNA synthetase associated region {ECO:0000313|EMBL:KKQ56180.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
YbaK/prolyl-tRNA synthetase associated region id=96298 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
bjp_ig3402_scaffold_5929_4
GWC2_OD1_37_73, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

1502..2248
DNA (747bp) protein (249aa)
Chromosome segregation and condensation protein ScpA n=1 Tax=uncultured bacterium RepID=K1ZC51_9BACT
Segregation and condensation protein A {ECO:0000313|EMBL:KKQ40444.1}; TaxID=1618697 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWC2_37_73.;"
chromosome segregation and condensation protein ScpA
bjp_ig3402_scaffold_5929_5
GWA2_OD1_39_41, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

2269..2808
DNA (540bp) protein (180aa)
Segregation and condensation protein B n=1 Tax=uncultured bacterium RepID=K2EQY5_9BACT
Putative transcriptional regulator Tax=GWA2_OD1_39_41
scpB; segregation and condensation protein B
bjp_ig3402_scaffold_5929_6
GWA2_OD1_45_90, Azambacteria, Parcubacteria, Bacteria

Not on your lists

2805..3839
DNA (1035bp) protein (345aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] id=9023 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
beta-lactamase (EC:3.5.2.6)
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:KKU19353.1}; TaxID=1618614 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWA2_45_90.;"
bjp_ig3402_scaffold_5929_7
GWC1_OD1-like_46_13, Azambacteria, Parcubacteria, Bacteria

Not on your lists

3919..4962
DNA (1044bp) protein (348aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase, phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000313|EMBL:KKU21909.1}; EC=2.7.8.13 {ECO:0000313|EMBL:KKU21909.1};; TaxID=1618619 species="B
mraY; phospho-N-acetylmuramoyl-pentapeptide transferase (EC:2.7.8.13)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000372EE42
bjp_ig3402_scaffold_5929_8
RBG_16_CPR_42_10_curated, Bacteria

Not on your lists

5147..6331
DNA (1185bp) protein (395aa)
NLP/P60 protein; K13694 lipoprotein Spr Tax=RBG_16_CPR_42_10_curated
NLP/P60 family lipoprotein; K13694 lipoprotein Spr id=5095285 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
lipoprotein
bjp_ig3402_scaffold_5929_9
R_RIF_OD1_06_33_13, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

6483..7190
DNA (708bp) protein (236aa)
metal dependent phosphohydrolase; K09163 hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_33_13_curated
Metal dependent phosphohydrolase id=4478678 bin=GWF2_Nitrospirae_44_13 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
metal dependent phosphohydrolase
bjp_ig3402_scaffold_5929_10
unknown

Not on your lists

comp(7357..7545)
DNA (189bp) protein (63aa)

This feature has no annotations

bjp_ig3402_scaffold_5929_11
RIFOXYB2_FULL_Peregrinibacteria_32_7_curated, Peregrinibacteria, Bacteria

Not on your lists

7628..9277
DNA (1650bp) protein (550aa)
murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase (EC:6.3.2.9); K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] Tax=RIFOXYB2_FULL_Peregrinibacteria_32_7_curated
murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase id=1273245 bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
bjp_ig3402_scaffold_5929_12
unknown

Not on your lists

comp(9772..10002)
DNA (231bp) protein (77aa)

This feature has no annotations

bjp_ig3402_scaffold_5929_13
R_OP11_Gottesmanbacteria_39_10, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

10046..11143
DNA (1098bp) protein (366aa)
thrC-2; Threonine synthase (EC:4.2.3.1); K01733 threonine synthase [EC:4.2.3.1] Tax=RIFCSPHIGHO2_01_FULL_OP11_Gottesmanbacteria_39_10_curated
threonine synthase (EC:4.2.3.1); K01733 threonine synthase [EC:4.2.3.1] id=5084095 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
threonine synthase
bjp_ig3402_scaffold_5929_14
R_RIF_OD1_08_38_39, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

11287..11748
DNA (462bp) protein (154aa)
putative small multi-drug export protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_38_39_curated
putative small multi-drug exporter id=96485 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Small multidrug export protein
bjp_ig3402_scaffold_5929_15
R_OP11_Gottesmanbacteria_39_10, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

11785..13221
DNA (1437bp) protein (479aa)
biotin carboxylase-like protein (EC:6.4.1.2) Tax=RIFCSPHIGHO2_01_FULL_OP11_Gottesmanbacteria_39_10_curated
ATP-grasp fold id=5102738 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
hypothetical protein
bjp_ig3402_scaffold_5929_16
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

13256..14314
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FFZ0_9BACT
stage V sporulation protein E; K03588 cell division protein FtsW Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
stage V sporulation protein E
bjp_ig3402_scaffold_5929_17
unknown

Not on your lists

14599..14841
DNA (243bp) protein (81aa)

This feature has no annotations

bjp_ig3402_scaffold_5929_18
RLO_OD1_Kaiserbacteria_45_26, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

14924..15283
DNA (360bp) protein (120aa)
tolA; outer membrane integrity protein Tax=RIFCSPLOWO2_12_FULL_OD1_Kaiserbacteria_45_26_curated
transmembrane_regions 15..34 id=133577 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
bjp_ig3402_scaffold_5929_19
GWC2_OD1-i_45_10, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

15363..15701
DNA (339bp) protein (113aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] id=2706 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
murG; UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapep tide)pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine-N-acetylmuramyl-(Pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000313|EMBL:KKT89791.1}; TaxID=1618700 species="Bacteria; Parcubacteria.;" sour
Displaying 19 items

View Taxonomy