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bjp_ig3402_scaffold_3187

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_3187_trna_3
unknown

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comp(3..77)
DNA (75bp)
transferRNA
bjp_ig3402_scaffold_3187_trna_2
unknown

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comp(177..250)
DNA (74bp)
transferRNA
bjp_ig3402_scaffold_3187_trna_1
unknown

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comp(442..513)
DNA (72bp)
transferRNA
bjp_ig3402_scaffold_3187_1
CG_CPR16-01, CG_CPR16, Bacteria

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686..1087
DNA (402bp) protein (134aa)
transmembrane_regions 5..27 Tax=CG_CPR16-01
seg 39..50 id=84584 bin=ACD56 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=ACD56 organism_group=OD1-i organism_desc=OD1-i
bjp_ig3402_scaffold_3187_2
RHI_OD1_Moranbacteria_40_10, Moranbacteria, Parcubacteria, Bacteria

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1056..2090
DNA (1035bp) protein (345aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=RIFCSPHIGHO2_12_FULL_OD1_Moranbacteria_40_10_curated
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=uncultured bacterium RepID=K1ZC28_9BACT rbh
bjp_ig3402_scaffold_3187_3

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2478..5081
DNA (2604bp) protein (868aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
pheT; Phenylalanine--tRNA ligase beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=uncultured bacterium RepID=K2AQV5_9BACT rbh
bjp_ig3402_scaffold_3187_4
Streptococcus ictaluri, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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5094..6749
DNA (1656bp) protein (552aa)
ABC transporter, ATP-binding protein n=1 Tax=Streptococcus ictaluri 707-05 RepID=G5K2H3_9STRE
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EHI69462.1}; TaxID=764299 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus ictal
ABC transporter ATP-binding protein
bjp_ig3402_scaffold_3187_5
Parcubacteria bacterium GW2011_GWA2_46_9, Parcubacteria, Bacteria

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7043..9070
DNA (2028bp) protein (676aa)
ttr:Tter_0051 DNA gyrase, B subunit (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] id=137389 bin=ACD8 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=ACD8 organism_group=OD1-i organism_desc=OD1-i rbh
DNA gyrase subunit B (EC:5.99.1.3)
Gyrase subunit B protein {ECO:0000313|EMBL:KKU48373.1}; TaxID=1618838 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_46_9.;"
bjp_ig3402_scaffold_3187_6
RBG_13_RIF_OD1_08_41_18_curated, RIF-OD1-8, Parcubacteria, Bacteria

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9443..10798
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035E26E1
NLP/P60 protein Tax=RBG_13_RIF_OD1_08_41_18_curated
hypothetical protein
bjp_ig3402_scaffold_3187_7

Not on your lists

10908..11558
DNA (651bp) protein (217aa)
LexA repressor {ECO:0000313|EMBL:KKR04219.1}; TaxID=1618962 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_39_13b.;"
LexA repressor id=4889284 bin=GWC2_OP3-like_45_7 species=Aerococcus viridans genus=Aerococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
LexA family transcriptional repressor
bjp_ig3402_scaffold_3187_8
unknown

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11548..11754
DNA (207bp) protein (69aa)

This feature has no annotations

bjp_ig3402_scaffold_3187_9

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11735..12394
DNA (660bp) protein (220aa)
Methylase-type I restriction-modification system protein {ECO:0000313|EMBL:KKR04222.1}; TaxID=1618962 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_39_13b.;"
Putative uncharacterized protein id=4344713 bin=GWC2_Ignavibacteria_38_9 species=ACD40 genus=ACD40 taxon_order=ACD40 taxon_class=ACD40 phylum=OP11 tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
hypothetical protein
bjp_ig3402_scaffold_3187_10
CG_CPR04_01, CG_CPR04, Bacteria

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comp(12525..13091)
DNA (567bp) protein (189aa)
coiled-coil 172..193 Tax=CG_CPR04_01
coiled-coil 3..31 id=96263 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
bjp_ig3402_scaffold_3187_11
RLO_OD1_Falkowbacteria_42_13, Falkowbacteria, Parcubacteria, Bacteria

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comp(13212..14159)
DNA (948bp) protein (316aa)
protein-(glutamine-N5) methyltransferase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=RIFCSPLOWO2_12_FULL_OD1_Falkowbacteria_42_13_curated
HemK family modification methylase; K02493 methyltransferase [EC:2.1.1.-] id=16942 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
hemK; protein methyltransferase HemK
bjp_ig3402_scaffold_3187_12
RBG_13_OD1_Moranbacteria_45_13_curated, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(14250..15383)
DNA (1134bp) protein (378aa)
peptide chain release factor 1; K02835 peptide chain release factor 1 Tax=RBG_13_OD1_Moranbacteria_45_13_curated
prfA; peptide chain release factor 1; K02835 peptide chain release factor RF-1 id=84654 bin=ACD56 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=ACD56 organism_group=OD1-i organism_desc=OD1-i
prfA; peptide chain release factor 1
bjp_ig3402_scaffold_3187_13

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15884..16900
DNA (1017bp) protein (339aa)
dehydrogenase (flavoproteins) id=8004 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
Dehydrogenase (Flavoprotein) {ECO:0000313|EMBL:EKE11044.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
flavin-dependent dehydrogenase
bjp_ig3402_scaffold_3187_14
RIFOXYC2_FULL_OP11_Curtissbacteria_41_11_curated, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

17121..18422
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GK12_9FIRM
nodulation competitiveness protein nfeD; K07403 membrane-bound serine protease (ClpP class) Tax=RIFOXYC2_FULL_OP11_Curtissbacteria_41_11_curated
nfeD; membrane bound protease
bjp_ig3402_scaffold_3187_15
GWC2_OP11_41_21, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

18455..19204
DNA (750bp) protein (250aa)
SPFH domain, Band 7 family protein n=1 Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V967_THELD
Band 7 protein {ECO:0000313|EMBL:KKS01593.1}; TaxID=1618415 species="Bacteria; Microgenomates.;" source="Microgenomates (Curtissbacteria) bacterium GW2011_GWC2_41_21.;"
hypothetical protein
Displaying 18 items

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