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bjp_ig3402_scaffold_4932

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_4932_1
CG_Elusi_02, Elusimicrobia, Bacteria

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comp(9..866)
DNA (858bp) protein (286aa)
ATPase n=1 Tax=Hydrogenobaculum sp. (strain Y04AAS1) RepID=B4UA18_HYDS0
ATPase; K07133 Tax=CG_Elusi_02
ATPase
bjp_ig3402_scaffold_4932_2

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comp(1048..1341)
DNA (294bp) protein (98aa)
DUF721 id=96463 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Uncharacterized protein {ECO:0000313|EMBL:EKD49397.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
bjp_ig3402_scaffold_4932_3
R_RIF_OD1_08_38_39, RIF-OD1-8, Parcubacteria, Bacteria

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comp(1437..2594)
DNA (1158bp) protein (386aa)
dnaN; DNA polymerase III subunit beta; K02338 DNA polymerase III subunit beta [EC:2.7.7.7] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_38_39_curated
DNA polymerase III, beta subunit (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] id=95967 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
dnaN; DNA polymerase III subunit beta
bjp_ig3402_scaffold_4932_4
R_OD1_Wolfebacteria_41_13b, Wolfebacteria, Parcubacteria, Bacteria

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comp(2897..4396)
DNA (1500bp) protein (500aa)
dnaA; chromosomal replication initiation protein; K02313 chromosomal replication initiator protein Tax=RIFCSPLOWO2_02_FULL_OD1_Wolfebacteria_41_13b_curated
Chromosomal replication initiator protein DnaA id=1968323 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria) rbh
chromosomal replication initiator protein DnaA
bjp_ig3402_scaffold_4932_5
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

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5266..5607
DNA (342bp) protein (114aa)
RNase P protein component Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
Ribonuclease P protein component id=3006306 bin=GWC1_CPR2_39_9 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
ribonuclease P protein component
bjp_ig3402_scaffold_4932_6

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6145..6834
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EB65_9BACT
Sporulation associated-membrane protein {ECO:0000313|EMBL:KKS26133.1}; TaxID=1618819 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_11.;"
sporulation associated-membrane protein
bjp_ig3402_scaffold_4932_7
GWA2_OD1_41_22_partial, Yanofskybacteria, Parcubacteria, Bacteria

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6849..7355
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FLK3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKS01459.1}; TaxID=1619023 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA2_41_22.;"
single-stranded nucleic acid binding R3H domain-containing protein
bjp_ig3402_scaffold_4932_8
R_RIF_OD1_08_38_39, RIF-OD1-8, Parcubacteria, Bacteria

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7523..8962
DNA (1440bp) protein (480aa)
Putative lipopolysaccharide O-side chain biosynthesis protein n=1 Tax=uncultured bacterium RepID=K2FRE3_9BACT
heteropolysaccharide repeat-containing protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_38_39_curated
heteropolysaccharide repeat-containing protein
bjp_ig3402_scaffold_4932_9
RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated, Moranbacteria, Parcubacteria, Bacteria

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9002..10555
DNA (1554bp) protein (518aa)
O-antigen polymerase n=1 Tax=uncultured bacterium RepID=K2DZX6_9BACT rbh
O-antigen polymerase Tax=RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated
bjp_ig3402_scaffold_4932_10
RHI_OD1_Moranbacteria_40_10, Moranbacteria, Parcubacteria, Bacteria

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11117..12364
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F2J9_9BACT
Bicarbonate transporter, ICT family protein Tax=RIFCSPHIGHO2_12_FULL_OD1_Moranbacteria_40_10_curated
bjp_ig3402_scaffold_4932_11
unknown

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comp(12356..13432)
DNA (1077bp) protein (359aa)

This feature has no annotations

bjp_ig3402_scaffold_4932_12
RLO_OD1_Falkowbacteria_45_13, Falkowbacteria, Parcubacteria, Bacteria

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comp(13482..13901)
DNA (420bp) protein (140aa)
two component transcriptional regulator, winged helix family; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=RIFCSPLOWO2_12_FULL_OD1_Falkowbacteri
hypothetical protein id=5801461 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
hypothetical protein
bjp_ig3402_scaffold_4932_13
RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(14076..14501)
DNA (426bp) protein (142aa)
pp-loop superfamily ATP-utilizing protein Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated
ribonuclease H id=16787 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
ribonuclease HI
bjp_ig3402_scaffold_4932_14
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

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comp(14692..16452)
DNA (1761bp) protein (587aa)
single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] Tax=RBG_13_RIF_OD1_08_37_53_curated
hau:Haur_4833 single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] id=3345201 bin=GWC1_OD1_38_17 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation rbh
single-stranded-DNA-specific exonuclease RecJ
bjp_ig3402_scaffold_4932_15
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

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comp(16747..17676)
DNA (930bp) protein (310aa)
Pyruvate ferredoxin oxidoreductase beta subunit n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SNL6_9BACT
Pyruvate ferredoxin oxidoreductase beta subunit {ECO:0000313|EMBL:BAL59080.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;
PorB subunit of pyruvate:flavodoxin oxidoreductase
bjp_ig3402_scaffold_4932_16
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(18148..18540)
DNA (393bp) protein (131aa)
hypothetical protein; K07460 putative endonuclease Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
UPF0102 protein ANT_20920 id=3736371 bin=GWC2_OD1_43_27 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
conserved hypothetical protein TIGR00252
bjp_ig3402_scaffold_4932_17

Not on your lists

comp(18866..20896)
DNA (2031bp) protein (677aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F0M0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE11514.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
bjp_ig3402_scaffold_4932_trna_4
unknown

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comp(20959..21031)
DNA (73bp)
transferRNA
bjp_ig3402_scaffold_4932_18
Microgenomates bacterium GW2011_GWC1_41_8, Microgenomates, Bacteria

Not on your lists

comp(21049..21309)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI000370E9BC
Endo/excinuclease amino domain protein {ECO:0000313|EMBL:KKS23221.1}; TaxID=1618519 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_41_8.;"
excinuclease ABC subunit C domain-containing protein
bjp_ig3402_scaffold_4932_trna_3
unknown

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comp(21375..21447)
DNA (73bp)
transferRNA
bjp_ig3402_scaffold_4932_trna_2
unknown

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comp(21540..21611)
DNA (72bp)
transferRNA
bjp_ig3402_scaffold_4932_trna_1
unknown

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comp(21698..21781)
DNA (84bp)
transferRNA
Displaying 22 items

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