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bjp_ig3402_scaffold_4946

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Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_4946_1

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125..403
DNA (279bp) protein (93aa)
RelB_DinJ: addiction module antitoxin, RelB id=87068 bin=ACD58 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Uncharacterized protein {ECO:0000313|EMBL:EKD56617.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
bjp_ig3402_scaffold_4946_2

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413..670
DNA (258bp) protein (86aa)
RelE-like id=87065 bin=ACD58 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Uncharacterized protein {ECO:0000313|EMBL:EKD56618.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
bjp_ig3402_scaffold_4946_3
R_OD1_Uhrbacteria_51_9, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

803..1021
DNA (219bp) protein (73aa)
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_51_9_curated
Uncharacterized protein id=2110530 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
bjp_ig3402_scaffold_4946_4
BJP_IG2158_OD1_28_51, Parcubacteria, Bacteria

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2027..2638
DNA (612bp) protein (204aa)
30S ribosomal protein S2 n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003611E1D
30S ribosomal protein S2P
Tax=BJP_IG2158_OD1_28_51
bjp_ig3402_scaffold_4946_5
RIFOXYC1_FULL_OD1_Moranbacteria_44_13_curated, Moranbacteria, Parcubacteria, Bacteria

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2779..3417
DNA (639bp) protein (213aa)
Elongation factor Ts n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NIX9_DESTT
translation elongation factor Ts; K02357 elongation factor Ts Tax=RIFOXYC1_FULL_OD1_Moranbacteria_44_13_curated
tsf; elongation factor Ts (EF-Ts) Tsf
bjp_ig3402_scaffold_4946_6

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3447..4262
DNA (816bp) protein (272aa)
PSP1 domain protein id=96587 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
PSP1 protein {ECO:0000313|EMBL:EKD49777.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Tpl protein
bjp_ig3402_scaffold_4946_7
unknown

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4271..4996
DNA (726bp) protein (242aa)

This feature has no annotations

bjp_ig3402_scaffold_4946_trna_1
unknown

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5116..5187
DNA (72bp)
transferRNA
bjp_ig3402_scaffold_4946_trna_2
unknown

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5321..5404
DNA (84bp)
transferRNA
bjp_ig3402_scaffold_4946_trna_3
unknown

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5514..5586
DNA (73bp)
transferRNA
bjp_ig3402_scaffold_4946_8

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5893..6432
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003631E68
Uncharacterized protein {ECO:0000313|EMBL:KKR03487.1}; TaxID=1618962 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_39_13b.;"
bjp_ig3402_scaffold_4946_trna_4
unknown

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6920..6990
DNA (71bp)
transferRNA
bjp_ig3402_scaffold_4946_9
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

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7053..7772
DNA (720bp) protein (240aa)
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31); K15888 tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_4
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific id=3013072 bin=GWC1_OD1_38_17 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
UDP pyrophosphate synthase
bjp_ig3402_scaffold_4946_10
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

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7914..8540
DNA (627bp) protein (209aa)
Protein-L-isoaspartate(D-aspartate)O-methyltrans ferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RBG_13_RIF_OD1_08_37_53_curated
L-isoaspartyl protein carboxyl methyltransferase (EC:2.1.1.77)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037526DA
bjp_ig3402_scaffold_4946_11
R_RIF_OD1_08_38_39, RIF-OD1-8, Parcubacteria, Bacteria

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8777..9808
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI0003737840
aminodeoxychorismate lyase; K07082 UPF0755 protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_38_39_curated
aminodeoxychorismate lyase
bjp_ig3402_scaffold_4946_12
unknown

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9823..9957
DNA (135bp) protein (45aa)

This feature has no annotations

bjp_ig3402_scaffold_4946_13
R_RIF_OD1_06_34_10, RIF-OD1-6, Parcubacteria, Bacteria

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10099..10314
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037925E1
preprotein translocase, SecE subunit Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_34_10_curated
bjp_ig3402_scaffold_4946_14
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

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10316..10858
DNA (543bp) protein (181aa)
Transcription termination/antitermination protein NusG n=1 Tax=uncultured bacterium RepID=K1ZI27_9BACT
nusG; transcription antitermination factor Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
antitermination protein NusG
bjp_ig3402_scaffold_4946_15
R_OD1_Uhrbacteria_47_25, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists


10991..11422
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00036ECFAA
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RIFCSPLOWO2_01_FULL_OD1_Uhrbacteria_47_25_curated
50S ribosomal protein L11
bjp_ig3402_scaffold_4946_16
R_OD1_Falkowbacteria_44_11, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


11590..12282
DNA (693bp) protein (231aa)
50S ribosomal protein L1 n=1 Tax=uncultured bacterium RepID=K1Z0S7_9BACT
ribosomal protein L1; K02863 large subunit ribosomal protein L1 Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_44_11_curated
50S ribosomal protein L1
bjp_ig3402_scaffold_4946_17
CG_CPR03_03, CG_CPR03, Bacteria

Not on your lists

12291..12698
DNA (408bp) protein (136aa)
Uncharacterized protein Tax=CG_CPR03_03
transmembrane_regions 7..24 id=67279 bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
bjp_ig3402_scaffold_4946_18
GWA2_OP11_nov_40_8, Levybacteria, Microgenomates, Bacteria

Not on your lists

12920..13585
DNA (666bp) protein (222aa)
hypothetical protein Magn03002348, partial Tax=GWA2_OP11_nov_40_8
hypothetical protein id=5085410 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
hypothetical protein
bjp_ig3402_scaffold_4946_19
unknown

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13546..13971
DNA (426bp) protein (142aa)

This feature has no annotations

bjp_ig3402_scaffold_4946_20
unknown

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13992..14390
DNA (399bp) protein (133aa)

This feature has no annotations

bjp_ig3402_scaffold_4946_21
GWA1_OD1_59_11, Parcubacteria, Bacteria

Not on your lists

14410..14625
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P7V1_9FIRM
Uncharacterized protein Tax=GWA1_OD1_59_11
hypothetical protein
bjp_ig3402_scaffold_4946_22
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists

14900..15520
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003600678
PaaX family transcriptional regulator; K02616 phenylacetic acid degradation operon negative regulatory protein Tax=CG_CPR10_03
PaaX family transcriptional regulator
bjp_ig3402_scaffold_4946_23
unknown

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15968..16429
DNA (462bp) protein (154aa)

This feature has no annotations

bjp_ig3402_scaffold_4946_24
R_OD1_Magasanikbacteria_41_13, Magasanikbacteria, Parcubacteria, Bacteria

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16818..17921
DNA (1104bp) protein (368aa)
2'-deoxycytidine 5'-triphosphate deaminase; K01494 dCTP deaminase [EC:3.5.4.13] Tax=RIFCSPHIGHO2_02_FULL_OD1_Magasanikbacteria_41_13_curated
Deoxycytidine deaminase n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YJY6_MOBAS id=133708 bin=ACD81 species=Aurantimonas manganoxydans genus=Aurantimonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
2-deoxycytidine 5-triphosphate deaminase
bjp_ig3402_scaffold_4946_25
CG_Woesearch_01, Woesearchaeota, Archaea

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18009..19502
DNA (1494bp) protein (498aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037C6CBF rbh
thymidylate synthase Tax=CG_Woesearch_01
thymidylate synthase
bjp_ig3402_scaffold_4946_26
GWA2_OD1_39_41, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

19484..20170
DNA (687bp) protein (229aa)
tmk; thymidylate kinase Tmk (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=planctomycete KSU-1 RepID=I3IKU6_9PLAN
Thymidylate kinase Tax=GWA2_OD1_39_41
Displaying 30 items

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