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bjp_ig3402_scaffold_816_29

Organism: BJP_IG3402_Parcubacteria_38_155

near complete RP 41 / 55 MC: 2 BSCG 42 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(40578..43652)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.6
  • Coverage: 999.99
  • Bit_score: 1238
  • Evalue 0.0
hor:Hore_01100 DNA-directed RNA polymerase, beta' subunit (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=3257 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 999.99
  • Bit_score: 1211
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 999.99
  • Bit_score: 1059
  • Evalue 0.0

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Taxonomy

R_RIF_OD1_08_40_12b → RIF-OD1-8 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 3075
AGAGATTTGGCAAAGGCGGAAATGAAAAGCATTGTTCCGATGAAAGTAATCTCCGAAATTGAATACCGGAATTTGTCGCTGAAATTCGGTTCTGTGTTTAAGGCCGGCACCGGAGCGGAAACAGTGAGGGAAATGCTTGCCCGCGCTGATTTAAAAAAGCTTAAAGATACTTTGACTGAAGAATTAAAAAGCGTCAGCAACGATGTCGTAAGGAAAAAAATTACCAAGCGCTTAAGATTGGCGCAAGGAATGATAAAAGCCGGGGTAAAGCCGCAATGGATGTGTTTCACGGTTTTACCCGTGATTCCGCCAGACTTAAGGCCGATGGTCCAGCTGGACGGCGGGCGCTTTGCCACTTCCGATTTGAATGATCTGTACCGAAGAGTTATCAATCGCAATAATCGCCTTAAGCATTTGATTGAATTAAAAGCCCCGGAAGTTATTTGCCGGAATGAAAAAAGAATGTTGCAGGAAGCGCTCGACGCCTTGATCGATAATAGCATCAAGCGCGGGCAAGTAACTATCGCTTCTACCGGCCAGAAAAGGCAGCTGAGATCTTTGGCTGATATGTTAAAAGGAAAGCAAGGGCGATTCAGGCAGAATTTGCTCGGCAAGCGCGTGGATTATTCCGGACGCTCCGTAATCGTGGTCGGACCGGAATTGAAATTGAATCAATGCGGATTGCCGAAAAATATGGCTTTGGAATTGTTCAAGCCATTCGTTATGCGAAAATTAATTGAAGGAAACTATGCCTATAATGTAAGGAGCGCCGCTCGCTTGATTGAGCAGGAGACTGTGGAAGTTTGGGATATTTTGGAAAATATTATTAATGGCAAGGTAGTGCTTTTAAACCGCGCTCCGACTCTTCACCGTTTGAGCATTCAGGCATTTTATCCCGTACTGATTGAAGGCAAGGCTATTCAGATTCATCCTTTGGTTTGCAAGGCTTTCAATGCTGACTTCGATGGAGACCAGATGGCGGTCCACTTGCCGCTAGGCGAAGAAGCGCAAAGAGAGGGCAGAGAGATAATGCTTTCAAGCAAGAATTTATTGAAGCCGGCAACCGGAGATCCGATCGTCATTCCTTATCAGGATATTATTTTGGGCTGCTATTATATGACCAAGATTATTTCCGGCGGCAAAGGCGAAGGCAAGGTTTTCTATGATGCCAAGGAAGCAATTTTGAATTATCAATTAAATATTATCGATCTTAAGGCGGAAATAAAATTGCGCAAAGATTTTGATATTAATGTCATTAAAAAAGAAGAAGCCAACAGCGGGTTATATATTAAGACTTCGGCGGGAAGAATTATTTTCAATGAAGCTTTGCCAAAATCCTTGCGGTTTGTGAACGAAGTTATGGATGCCAAGAACTTAAAAGCTCTAGTGGCTGATTCGCTGGAAAAAGCCGGCGCTGATGAAACGGTAGACTTAGTCGATAGGATTAAAAAATTGGGATTTGAATATGTGACTATTTCCGGCTTGAGCTGGGGAATGAGCGATTTGAAGATACCGGCAGAAAAAGCCGCTTTAATAGAAGAAGCGAAAAAGCAAGCGGAAATTATTGAGCATCAGTATAATGAAGGTTTGCTTACCAGCGATGAACGGAGAACTAAAATAATCGAAACATGGACTGAAACCAAAAATAAAGTTACTAAAGCTGTTTTAAACACTTTGGATCCGAATAGTCCTGTTTTTTTAATGATAGAATCCGGCGCAAGAAGTTCGTGGGCGGTTGTCGCGCAGATGATGGGAATGAAAGGGCTGGTTGTCAATCCGGCCGGAGAAACGATCGAGTTGCCGATTAAAAATAGTTTTAAGGAAGGTTTTGATGTTTTGGAATATTTCATTTCCACTCACGGAGCCAGAAAAGGCATGACTGATATTGCTCTTAGAACCGCTACCGCCGGTTATTTGACCAGGCGCTTGGTGGATGTCGCGCAAGATATGGTTATTAACGAAATTGATTGCGGAAGCAAGCAAAGCATTATTATTCCAAGGATTGACCAATATGAATTAGGCAGAGGCTTTGCGGCGAGAATTTACGGCCGAGCTGCCGCGGAAGACATTATTGATCCAAAAACAAAGAAGGTTTTAGCGCCGGCAGGCGAATTTATTCCGAAAGATATTGCCAAGGTGATTGAAAATATCCCAGGGATTGATTCAGTTAAAGTTCGCACAGTTATTTACTGCAAGGCCGAACGGGGAATTTGCCAAAAATGCTATGGTTACGATTTGGGCAGGAATAAGCCCATTGCTAAAGGCGAAGCTATCGGTATTGTCACCGCGCAAGCTATCGGCGAGCCCGGAACTCAGCTGACCATGAAGACTTTCCATAGCGGAGGAGTCGCTGGACGGGATATCACCCAGGGCTTGCCTCGCGTGGAAGAAATTTTCGAGGCTCGCGTTCCAAAAGGAAAAGCCTTGATTTCCGAAGTGGAGGGAAAAGTTATCGATGTTGTCGTTTTGACCAACAAAAAAATCATCCGCATTAATATTACGGATGAAAAAGGAAAAGCGGAAGCCGAAGTGAAAGAATACGAAGTAGATTCCGATATCGCGATTTCTGTCGAGAAAGGCGCGACTATCAAGAAAGGACAAAGATTGACCGAAGGGCACATTGATATCCATGAACTTTTTAAGCTGGTTGATAAAATGGCGGTGGTAGAATATATTATCGGCGAAGTGCAGGAAATTTACACCGCTCAAGGAGAAGGCATCAATGATAAGCATATTGAATTGATTGTCAGGCAGATGTTCTCGAGAATTATAATCAGCGATGCCGGAGATACCGAATTGCCAGAAGGCAGCGTGGTGGAAGGGGTTCAATACAATAGGGTAAATGCCATGGCTAAGAAAGAAGGCAAGAAGCCGGCCAAAGGCGAAGAATTGCTGCTTGGCATTACTAAAGTATCACTTTCCACCGAAAGCTTCCTGGCTGCCGCTTCGTTCCAGGAAACCGCCCGCGTGCTTATTTCCGCCGCTTTATTCGGCAAGTCCGATGAATTGAAAGGCCTGAAAGAAAATGTCATTATTGGCAAGCTGATACCGGCCGGAACAGGATTTGAAAAATAA
PROTEIN sequence
Length: 1025
RDLAKAEMKSIVPMKVISEIEYRNLSLKFGSVFKAGTGAETVREMLARADLKKLKDTLTEELKSVSNDVVRKKITKRLRLAQGMIKAGVKPQWMCFTVLPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKHLIELKAPEVICRNEKRMLQEALDALIDNSIKRGQVTIASTGQKRQLRSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLNQCGLPKNMALELFKPFVMRKLIEGNYAYNVRSAARLIEQETVEVWDILENIINGKVVLLNRAPTLHRLSIQAFYPVLIEGKAIQIHPLVCKAFNADFDGDQMAVHLPLGEEAQREGREIMLSSKNLLKPATGDPIVIPYQDIILGCYYMTKIISGGKGEGKVFYDAKEAILNYQLNIIDLKAEIKLRKDFDINVIKKEEANSGLYIKTSAGRIIFNEALPKSLRFVNEVMDAKNLKALVADSLEKAGADETVDLVDRIKKLGFEYVTISGLSWGMSDLKIPAEKAALIEEAKKQAEIIEHQYNEGLLTSDERRTKIIETWTETKNKVTKAVLNTLDPNSPVFLMIESGARSSWAVVAQMMGMKGLVVNPAGETIELPIKNSFKEGFDVLEYFISTHGARKGMTDIALRTATAGYLTRRLVDVAQDMVINEIDCGSKQSIIIPRIDQYELGRGFAARIYGRAAAEDIIDPKTKKVLAPAGEFIPKDIAKVIENIPGIDSVKVRTVIYCKAERGICQKCYGYDLGRNKPIAKGEAIGIVTAQAIGEPGTQLTMKTFHSGGVAGRDITQGLPRVEEIFEARVPKGKALISEVEGKVIDVVVLTNKKIIRINITDEKGKAEAEVKEYEVDSDIAISVEKGATIKKGQRLTEGHIDIHELFKLVDKMAVVEYIIGEVQEIYTAQGEGINDKHIELIVRQMFSRIIISDAGDTELPEGSVVEGVQYNRVNAMAKKEGKKPAKGEELLLGITKVSLSTESFLAAASFQETARVLISAALFGKSDELKGLKENVIIGKLIPAGTGFEK*