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bjp_ig3402_scaffold_816

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_816_1
R_Omnitrophica_44_11, Omnitrophica, Bacteria

Not on your lists

comp(3..728)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YQL8_9BACT
transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Omnitrophica_44_11_curated
bjp_ig3402_scaffold_816_2
GWA2_Berkelbacteria_35_9, Berkelbacteria, Bacteria

Not on your lists

comp(738..2621)
DNA (1884bp) protein (628aa)
cak:Caul_0324 N-6 DNA methylase id=86860 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Uncharacterized protein {ECO:0000313|EMBL:KKP88721.1}; TaxID=1618333 species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA2_35_9.;"
N-6 DNA Methylase family protein
bjp_ig3402_scaffold_816_3
RIFOXYB1_FULL_OD1_Magasanikbacteria_40_15_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2744..2962)
DNA (219bp) protein (73aa)
Tax=RIFOXYB1_FULL_OD1_Magasanikbacteria_40_15_curated
bjp_ig3402_scaffold_816_4
GWA2_OD1_47_12, Parcubacteria, Bacteria

Not on your lists

comp(3134..3817)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036FC901
Replication and repair protein RadC protein {ECO:0000313|EMBL:KKU57591.1}; TaxID=1618841 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_12.;"
DNA repair protein RadC
bjp_ig3402_scaffold_816_5
CG_CPR01_01, CG_CPR01, Bacteria

Not on your lists

comp(3907..5070)
DNA (1164bp) protein (388aa)
hypothetical protein Tax=CG_CPR01_01
hypothetical protein id=130872 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
bjp_ig3402_scaffold_816_6
unknown

Not on your lists

5153..5371
DNA (219bp) protein (73aa)

This feature has no annotations

bjp_ig3402_scaffold_816_7
R_SM2F11_46_24, SM2F11, Bacteria

Not on your lists

comp(5389..8298)
DNA (2910bp) protein (970aa)
excinuclease ABC subunit A; K03701 excinuclease ABC subunit A Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_24_curated
UvrABC system protein A id=3239272 bin=GWB1_KAZAN_52_7 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWB1_KAZAN_52_7 organism_group=Kazan
uvrA; excinuclease ABC subunit A
bjp_ig3402_scaffold_816_8
CG_CPR10_02, CG_CPR10, Bacteria

Not on your lists

8657..10729
DNA (2073bp) protein (691aa)
membrane carboxypeptidase/penicillin-binding protein; K05367 penicillin-binding protein 1C [EC:2.4.1.-] Tax=CG_CPR10_02
pbpB; penicillin-binding protein 2; K05367 penicillin-binding protein 1C [EC:2.4.1.-] id=5095212 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
membrane carboxypeptidase
bjp_ig3402_scaffold_816_9
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists

comp(10829..11134)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CWL1_9BACT
hypothetical protein Tax=CG_CPR10_03
hypothetical protein
bjp_ig3402_scaffold_816_10
CG_CPR10_02, CG_CPR10, Bacteria

Not on your lists

comp(11135..17611)
DNA (6477bp) protein (2159aa)
hypothetical protein; K06894 Tax=CG_CPR10_02
alpha-2-macroglobulin domain-containing protein; K06894 id=5093957 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
hypothetical protein
bjp_ig3402_scaffold_816_11
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(17782..20577)
DNA (2796bp) protein (932aa)
hypothetical protein; K09118 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
ppd:Ppro_3567 hypothetical protein; K09118 hypothetical protein id=72698 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
bjp_ig3402_scaffold_816_12
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

20874..21221
DNA (348bp) protein (116aa)
hypothetical protein; K08972 putative membrane protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
Putative uncharacterized protein id=1915923 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
membrane protein
bjp_ig3402_scaffold_816_13
GWA2_OD1_45_90, Azambacteria, Parcubacteria, Bacteria

Not on your lists

21669..23450
DNA (1782bp) protein (594aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F0I1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKU19167.1}; TaxID=1618614 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWA2_45_90.;"
putative ABC transporter substrate binding protein
bjp_ig3402_scaffold_816_trna_1
unknown

Not on your lists

23507..23590
DNA (84bp)
transferRNA
bjp_ig3402_scaffold_816_14
CG_CPR05_02, CG_CPR05, Bacteria

Not on your lists

23674..25470
DNA (1797bp) protein (599aa)
hypothetical protein Tax=CG_CPR05_02
RNA-metabolising metallo-beta-lactamase id=3013277 bin=GWC1_OD1_38_17 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RNA-metabolising metallo-beta-lactamase
bjp_ig3402_scaffold_816_15
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

Not on your lists

26159..26740
DNA (582bp) protein (194aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW00755.1}; TaxID=1618850 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
transmembrane_regions 30..52 id=52874 bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
bjp_ig3402_scaffold_816_16
unknown

Not on your lists

27990..28241
DNA (252bp) protein (84aa)

This feature has no annotations

bjp_ig3402_scaffold_816_17
R_OD1_Falkowbacteria_39_8, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

28313..29329
DNA (1017bp) protein (339aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_39_8_curated
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase id=4790119 bin=GWC2_OD1_43_27 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete) rbh
bjp_ig3402_scaffold_816_18
unknown

Not on your lists

comp(29360..29566)
DNA (207bp) protein (69aa)

This feature has no annotations

bjp_ig3402_scaffold_816_19
unknown

Not on your lists

comp(29621..29752)
DNA (132bp) protein (44aa)

This feature has no annotations

bjp_ig3402_scaffold_816_20
RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(30160..31473)
DNA (1314bp) protein (438aa)
glmM; phosphomannomutase; K01840 phosphomannomutase [EC:5.4.2.8] Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CVR2_9BACT
glmM; phosphomannomutase
bjp_ig3402_scaffold_816_21
RLO_OD1_Jorgensenbacteria_42_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

31696..32025
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2GCW9_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Jorgensenbacteria_42_11_curated
hypothetical protein
bjp_ig3402_scaffold_816_22
R_OD1_46_26, Microgenomates, Bacteria

Not on your lists

32365..33411
DNA (1047bp) protein (349aa)
GTP-binding protein YchF; K06942 Tax=RIFCSPLOWO2_01_FULL_OD1_46_26_curated
translation-associated GTPase id=3013268 bin=GWC1_OD1_38_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
GTP-binding protein YchF
bjp_ig3402_scaffold_816_23
unknown

Not on your lists

33718..34323
DNA (606bp) protein (202aa)

This feature has no annotations

bjp_ig3402_scaffold_816_24
GWC1_OD1_38_17, Parcubacteria, Bacteria

Not on your lists

34354..34791
DNA (438bp) protein (146aa)
Single-stranded DNA-binding protein id=3013257 bin=GWC1_OD1_38_17 species=Eikenella corrodens genus=Eikenella taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
Single-stranded DNA-binding protein {ECO:0000313|EMBL:KKQ59136.1}; TaxID=1618896 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_17.;"
hypothetical protein
bjp_ig3402_scaffold_816_25
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists


comp(35218..36255)
DNA (1038bp) protein (346aa)
recA; multifunctional SOS repair factor Tax=CG_CPR04_01
Protein RecA id=4790085 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete) rbh
recA protein
bjp_ig3402_scaffold_816_26
RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(36518..37222)
DNA (705bp) protein (235aa)
PEGA domain-containing protein Tax=RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated
XRE family transcriptional regulator id=129936 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
XRE family transcriptional regulator
bjp_ig3402_scaffold_816_27
RBG_13_RIF_OD1_08_41_18_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(37347..39638)
DNA (2292bp) protein (764aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DZM8_9BACT
putative cell division FtsK/SpoIIIE Tax=RBG_13_RIF_OD1_08_41_18_curated
cell division protein FtsK
bjp_ig3402_scaffold_816_28
unknown

Not on your lists

comp(39821..40210)
DNA (390bp) protein (130aa)

This feature has no annotations

bjp_ig3402_scaffold_816_29
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(40578..43652)
DNA (3075bp) protein (1025aa)
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
hor:Hore_01100 DNA-directed RNA polymerase, beta' subunit (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=3257 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
DNA-directed RNA polymerase subunit beta'
Displaying 30 items

View Taxonomy