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bjp_ig3402_scaffold_3875_8

Organism: BJP_IG3402_Parcubacteria_38_155

near complete RP 41 / 55 MC: 2 BSCG 42 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(7846..8829)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000313|EMBL:KKT27222.1}; TaxID=1618828 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_43_9b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.4
  • Coverage: 325.0
  • Bit_score: 326
  • Evalue 3.60e-86
DNA-directed RNA polymerase subunit alpha id=3013128 bin=GWC1_OD1_38_17 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 50.6
  • Coverage: 324.0
  • Bit_score: 317
  • Evalue 1.50e-83
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 327.0
  • Bit_score: 242
  • Evalue 1.40e-61

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Taxonomy

Parcubacteria bacterium GW2011_GWA2_43_9b → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 984
ATGAATATTATTACATTGCCAAAGCCGCCAAAATTAGTTAAAAAAGAAGGTAATTTGGGAATTTTTGAAATAGATGATATTTATCCCGGATACGGAGTTACTCTGGCGAATGCCTTGCGGAGAGTTATGCTTTCCAGCTTGCAGGGCGCGGCTGTGACATCGGCCAAAATCAGAAATATCGCGCATGAATTTTCGACATTGCCGCATGTTAAGGAAGATATGGTGGAAATAATTTTAAATTTAAAGCAATTAAGATTTAAATTATTCGGCGATGAATCGGTAAAAATCAATATTTCCGCCAAAGGGGATGGCAAAGTAACCGCAGCCGACATCAAGCCTAACAGCCAGATTGAAGTTATAAATAAAAATGCTCCAATCGCTACTCTTACCAATAAAAACGCTGAATTAAATATTGAACTGACTGTTGAAAAAGGACTGGGATATTTAACCGTCGAACAGCAGGCAAAAGGCAAGAAAGAAACCGGCGTGATTGCCATTGATGCGATTTTTTCTCCTGTTCGAAAAGTTGGTTATGAAGTGGAAAATGCTCGAGTTGGACAGAGAACTGATTATAATAAGATAACATTTGAAATTGAAACAGATGGAAGCATTGACCCAGAAGATGCTCTTAGCCAGTCCGCGGAAATTTTAATTAAGCAATTTGAGGCAATAAGGCTGGTTAGCGGCAAGGCTATTGGGAAAGAGGAAATTATTTCTGATATAGCAGATGAAAAAGAAAAGAAAAAAGTCAAGGAAACCGTGAAAGAGCCGCAAAAAGACGAATCAGCCTTGCTGAAATCAGTTGAGGGCATGAATTTTTCTGCCAGAACACTAGCGGCGCTGAAAGAAAATAAATTAAAAACTGCTGGCGCTATTTCTAAGAAATCTGAAGCGGATTTATTGGAAATGCCGAAAATGGGCGCGGTTAGCGTGAAGGAAATTAAAAAAGAATTAGGCAAATTAGGTTTAGTTTTAAAACAGTAA
PROTEIN sequence
Length: 328
MNIITLPKPPKLVKKEGNLGIFEIDDIYPGYGVTLANALRRVMLSSLQGAAVTSAKIRNIAHEFSTLPHVKEDMVEIILNLKQLRFKLFGDESVKINISAKGDGKVTAADIKPNSQIEVINKNAPIATLTNKNAELNIELTVEKGLGYLTVEQQAKGKKETGVIAIDAIFSPVRKVGYEVENARVGQRTDYNKITFEIETDGSIDPEDALSQSAEILIKQFEAIRLVSGKAIGKEEIISDIADEKEKKKVKETVKEPQKDESALLKSVEGMNFSARTLAALKENKLKTAGAISKKSEADLLEMPKMGAVSVKEIKKELGKLGLVLKQ*