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bjp_ig3402_scaffold_4539

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_4539_1
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

2..607
DNA (606bp) protein (202aa)
Sigma-70 region 4 protein n=1 Tax=uncultured bacterium RepID=K1XT18_9BACT
hypothetical protein Tax=CG_Wolfe_01
hypothetical protein
bjp_ig3402_scaffold_4539_2
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

736..2037
DNA (1302bp) protein (434aa)
alias=gwe2_scaffold_198_5 Tax=CG_Wolfe_01
alias=gwe2_scaffold_198_5 id=15190222 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete rbh
hypothetical protein
bjp_ig3402_scaffold_4539_3
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

2056..2451
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000380549D
hypothetical protein Tax=CG_Wolfe_01
hypothetical protein
bjp_ig3402_scaffold_4539_4
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

2391..3314
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036AD766
hypothetical protein Tax=CG_Wolfe_01
hypothetical protein
bjp_ig3402_scaffold_4539_5
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists


3424..4860
DNA (1437bp) protein (479aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=CG_Wolfe_01
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartyl-tRNA synthetase n=1 Tax=sediment metagenome RepID=D9PKA2_9ZZZZ rbh
bjp_ig3402_scaffold_4539_6
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

4865..5131
DNA (267bp) protein (89aa)
ndk; nucleoside diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
hypothetical protein id=5801460 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
bjp_ig3402_scaffold_4539_7
R_OD1_Giovannonibacteria_43_16, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

5128..5412
DNA (285bp) protein (95aa)
ndk; nucleoside diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RIFCSPHIGHO2_02_OD1_Giovannonibacteria_43_16_curated
nucleoside diphosphate kinase (EC:2.7.4.6)
hypothetical protein n=1 Tax=candidate division OD1 bacterium SCGC AAA011-G05 RepID=UPI000373148B
bjp_ig3402_scaffold_4539_8
GWA1_OD1_48_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

5375..5866
DNA (492bp) protein (164aa)
NUDIX hydrolase id=15189890 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Tax=GWA1_OD1_48_11
bjp_ig3402_scaffold_4539_trna_1
unknown

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comp(6335..6406)
DNA (72bp)
transferRNA
bjp_ig3402_scaffold_4539_9
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

6796..7035
DNA (240bp) protein (80aa)
peptidase M50 Tax=CG_Wolfe_01
Protein containing Peptidase M50 domain id=2824361 bin=GWC1_OD1_38_17 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
peptidase M50
bjp_ig3402_scaffold_4539_10
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

7011..7421
DNA (411bp) protein (137aa)
peptidase M50 Tax=CG_Wolfe_01
Protein containing Peptidase M50 domain id=2824361 bin=GWC1_OD1_38_17 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
peptidase
bjp_ig3402_scaffold_4539_11

Not on your lists

7435..7668
DNA (234bp) protein (78aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN91761.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Spermine synthase id=3486321 bin=GWA1_ZB2_49_26 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
bjp_ig3402_scaffold_4539_12

Not on your lists

7719..8546
DNA (828bp) protein (276aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN91761.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Spermine synthase id=3486321 bin=GWA1_ZB2_49_26 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
spermine synthase
bjp_ig3402_scaffold_4539_13

Not on your lists

8515..8820
DNA (306bp) protein (102aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN91761.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
bjp_ig3402_scaffold_4539_14
CG_Kuenen_02, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(8926..9603)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AID8_9BACT
hypothetical protein Tax=CG_Kuenen_02
hypothetical protein
bjp_ig3402_scaffold_4539_15
GWD2_OD1_38_42, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(9596..9850)
DNA (255bp) protein (85aa)
Tax=GWD2_OD1_38_42
bjp_ig3402_scaffold_4539_16
unknown

Not on your lists

9886..9984
DNA (99bp) protein (33aa)

This feature has no annotations

bjp_ig3402_scaffold_4539_17
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists


10010..10426
DNA (417bp) protein (139aa)
30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=CG_Wolfe_01
30S ribosomal protein S12 id=3736609 bin=GWC2_OD1_43_27 species=Parvimonas micra genus=Parvimonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
30S ribosomal protein S12
bjp_ig3402_scaffold_4539_18
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists


10529..10909
DNA (381bp) protein (127aa)
30S ribosomal protein S7 n=1 Tax=uncultured bacterium RepID=K1XGR5_9BACT
30S ribosomal protein S7 Tax=CG_Wolfe_01
30S ribosomal protein S7
bjp_ig3402_scaffold_4539_19
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10916..11461
DNA (546bp) protein (182aa)
Phosphoribosyltransferase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P7X6_9DELT
purine phosphoribosyltransferase; K07101 Tax=RBG_13_Deltaproteobacteria_61_14_curated
phosphoribosyl transferase domain-containing protein
bjp_ig3402_scaffold_4539_20
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

11621..13594
DNA (1974bp) protein (658aa)
translation elongation factor 2 (EF-2/EF-G); K02355 elongation factor G Tax=CG_Wolfe_01
fusA; elongation factor G; K02355 elongation factor G id=15189918 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
elongation factor G
bjp_ig3402_scaffold_4539_21
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists


13597..13947
DNA (351bp) protein (117aa)
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=CG_Wolfe_01
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 id=15189919 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
50S ribosomal protein L13
bjp_ig3402_scaffold_4539_22
RBG_13_OD1_Wolfebacteria_41_7_curated, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists


13950..14423
DNA (474bp) protein (158aa)
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RBG_13_OD1_Wolfebacteria_41_7_curated
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 id=15189920 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
30S ribosomal protein S9
bjp_ig3402_scaffold_4539_23
GWB1_OD1_45_9, Parcubacteria, Bacteria

Not on your lists

14607..14960
DNA (354bp) protein (118aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU15170.1}; TaxID=1618879 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_45_9.;"
bjp_ig3402_scaffold_4539_24
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(14923..16410)
DNA (1488bp) protein (496aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037BDF9D
alias=gwe2_scaffold_198_16 Tax=CG_Wolfe_01
bjp_ig3402_scaffold_4539_25
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

16468..17754
DNA (1287bp) protein (429aa)
murA3; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3 (EC:2.5.1.7) Tax=CG_Wolfe_01
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI0003798AA1 rbh
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
bjp_ig3402_scaffold_4539_26
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

17874..18881
DNA (1008bp) protein (336aa)
MreB/Mrl family cell shape determining protein; K03569 rod shape-determining protein MreB and related proteins Tax=CG_Wolfe_01
mreB; rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins id=15190213 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
rod shape-determining protein MreB
bjp_ig3402_scaffold_4539_27
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

19006..19452
DNA (447bp) protein (149aa)
DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] id=15190032 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
DNA polymerase III, delta' subunit Tax=CG_Wolfe_01
AAA ATPase
Displaying 28 items

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