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bjp_ig3402_scaffold_5709

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_5709_1
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(3..731)
DNA (729bp) protein (243aa)
Ribonuclease Y id=2170889 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hydrolase, HAD superfamily; K06950 uncharacterized protein Tax=GWB2_Nitrospirae_47_37_curated
HAD superfamily hydrolase
bjp_ig3402_scaffold_5709_2
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

1555..2526
DNA (972bp) protein (324aa)
hypothetical protein; K07090 Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
Putative uncharacterized protein id=1937757 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum) rbh
hypothetical protein
bjp_ig3402_scaffold_5709_3
CG_Delta_01, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2517..2966
DNA (450bp) protein (150aa)
hypothetical protein Tax=CG_Delta_01
Putative uncharacterized protein id=4685155 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
bjp_ig3402_scaffold_5709_4
Candidatus Magnetobacterium bavaricum, Candidatus Magnetobacterium, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

2969..3817
DNA (849bp) protein (283aa)
Universal stress protein {ECO:0000313|EMBL:KJU86082.1}; TaxID=29290 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetobacterium.;" source="Candidatus Magnetobacterium ba
Universal stress protein id=4916365 bin=GWC2_Nitrospirae-rel_56_14 species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
putative permease
bjp_ig3402_scaffold_5709_5
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(4076..4357)
DNA (282bp) protein (94aa)
Putative uncharacterized protein id=2167704 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein Tax=GWB2_Nitrospirae_47_37_curated
hypothetical protein
bjp_ig3402_scaffold_5709_6
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(4354..4635)
DNA (282bp) protein (94aa)
Putative uncharacterized protein id=2167705 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein Tax=GWB2_Nitrospirae_47_37_curated
hypothetical protein
bjp_ig3402_scaffold_5709_7
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists


comp(4637..4861)
DNA (225bp) protein (75aa)
30S ribosomal protein S18 id=2167706 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
rpsR; ribosomal protein S18; K02963 small subunit ribosomal protein S18 Tax=GWB2_Nitrospirae_47_37_curated
rpsR; 30S ribosomal protein S18
bjp_ig3402_scaffold_5709_8
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(4877..5275)
DNA (399bp) protein (133aa)
Single-stranded DNA-binding protein id=2167707 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
single-strand binding protein family; K03111 single-strand DNA-binding protein Tax=GWB2_Nitrospirae_47_37_curated
single-strand binding protein family
bjp_ig3402_scaffold_5709_9
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists


comp(5290..5661)
DNA (372bp) protein (124aa)
30S ribosomal protein S6 id=2167708 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
rpsF; ribosomal protein S6; K02990 small subunit ribosomal protein S6 Tax=GWB2_Nitrospirae_47_37_curated
rpsF; 30S ribosomal protein S6
bjp_ig3402_scaffold_5709_10
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(5801..6589)
DNA (789bp) protein (263aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=2167709 bin=GWB2_Nitrospirae_rel_47_37 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
two component sigma-54 specific Fis family transcriptional regulator; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG Tax=GWB2_Nitrospirae_47_37_curated
transcriptional regulator
Displaying 10 items

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