ggKbase | organisms

Consensus taxonomy: Nitrospirae → Bacteria

Metagenomic Context

Parent: BJP_IG3402_UNK Curated version: BJP_Ig3402_Miz_0z3_300_2014_Nitrospirae_40_5_curated

Properties

Avg. coverage: 4.86 Longest contig: 7.81 Kbp Bin length: 1.40 Mbp GC content: 39.70 %

Contigs count: 758 Features count: 1870 rRNAs count: 0 tRNAs count: 17

Genome completeness

partial RP 35 / 55 MC: 3 BSCG 36 / 51 MC: 2 ASCG 8 / 38 MC: 1

Displaying items 451-500 of 758 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
bjp_ig3402_scaffold_41353 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1293 bp	40.29	5.57	88.86
bjp_ig3402_scaffold_46960 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1157 bp	41.31	5.06	100.61
bjp_ig3402_scaffold_52848 Species: Caldisalinibacter kiritimatiensis (50%)	2	1044 bp	43.68	3.74	98.28
bjp_ig3402_scaffold_21899 Species: mine drainage metagenome (50%)	2	2171 bp	69.18	6.77	75.03
bjp_ig3402_scaffold_38332 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1379 bp	36.55	2.94	94.42
bjp_ig3402_scaffold_41871 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1278 bp	40.14	4.34	61.97
bjp_ig3402_scaffold_46455 Species: GWF2_Nitrospirae_44_13_curated (50%)	2	1168 bp	39.47	3.98	98.37
bjp_ig3402_scaffold_53039 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1040 bp	38.94	2.88	88.85
bjp_ig3402_scaffold_16665 Species: BJP_IG2158_Nitrospirales_45_240 (50%)	2	2727 bp	41.77	5.39	100.55
bjp_ig3402_scaffold_16666 Species: RBG_13_Nitrospirae_39_12_curated (100%)	2	2726 bp	41.31	5.06	97.29
bjp_ig3402_scaffold_40570 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1315 bp	38.71	5.70	97.64
bjp_ig3402_scaffold_38339 Species: Thermodesulfovibrio yellowstonii (50%)	2	1379 bp	44.67	5.22	80.49
bjp_ig3402_scaffold_47994 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1135 bp	37.27	4.63	74.27
bjp_ig3402_scaffold_43981 Species: RBG_13_Nitrospirae_39_12_curated (50%)	2	1224 bp	38.32	3.68	83.09
bjp_ig3402_scaffold_23206 Species: GWF2_Bacteroidetes_38_335_curated (50%)	2	2072 bp	35.86	5.72	77.32
bjp_ig3402_scaffold_9711 Species: CG_CP01_01 (50%)	2	4290 bp	38.79	5.38	96.64
bjp_ig3402_scaffold_40575 Species: GWF2_Nitrospirae_44_13_curated (50%)	2	1315 bp	40.76	5.59	95.13
bjp_ig3402_scaffold_35927 Species: RLO_Sulfuricurvum_43_24 (50%)	2	1454 bp	36.24	4.02	53.65
bjp_ig3402_scaffold_24313 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1996 bp	39.08	4.28	67.03
bjp_ig3402_scaffold_42393 Species: Caloramator australicus (50%)	2	1264 bp	39.40	6.05	77.61
bjp_ig3402_scaffold_30850 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1646 bp	34.75	4.01	82.20
bjp_ig3402_scaffold_47745 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1140 bp	37.54	3.82	97.63
bjp_ig3402_scaffold_23979 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	2019 bp	38.39	3.94	89.45
bjp_ig3402_scaffold_25500 Species: RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated (50%)	2	1924 bp	41.74	4.83	88.88
bjp_ig3402_scaffold_31773 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1607 bp	37.09	4.29	98.01
bjp_ig3402_scaffold_32822 Species: CG_CP01_01 (50%)	2	1564 bp	39.19	7.77	61.00
bjp_ig3402_scaffold_39510 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1345 bp	39.63	4.13	84.09
bjp_ig3402_scaffold_27047 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1835 bp	39.73	5.40	94.66
bjp_ig3402_scaffold_44280 Species: Geobacter lovleyi (50%)	2	1218 bp	40.89	3.57	90.64
bjp_ig3402_scaffold_26785 Species: RIFOXYB12_FULL_Lentisphaerae_65_16_curated (100%)	2	1848 bp	72.89	14.12	81.33
bjp_ig3402_scaffold_43738 Species: RLO_Nitrospinae_45_22 (100%)	2	1230 bp	45.04	4.39	47.32
bjp_ig3402_scaffold_24578 Species: CG_Nitrosp_01 (50%)	2	1979 bp	40.88	4.70	84.44
bjp_ig3402_scaffold_39002 Species: RBG_13_Nitrospirae_39_12_curated (50%)	2	1358 bp	37.19	5.63	90.80
bjp_ig3402_scaffold_33657 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1533 bp	39.99	5.38	100.78
bjp_ig3402_scaffold_52361 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1052 bp	41.06	3.71	103.80
bjp_ig3402_scaffold_55338 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1001 bp	38.56	3.75	74.93
bjp_ig3402_scaffold_40332 Species: Anaerolinea thermophila (50%)	2	1322 bp	32.68	3.40	83.28
bjp_ig3402_scaffold_35427 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1471 bp	40.18	3.47	100.95
bjp_ig3402_scaffold_31782 Species: Thermodesulfovibrio yellowstonii (50%)	2	1607 bp	36.78	4.95	91.66
bjp_ig3402_scaffold_34959 Species: RBG_16_Deltaproteobacteria_58_17_curated (50%)	2	1487 bp	43.51	3.83	81.91
bjp_ig3402_scaffold_54904 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1008 bp	37.00	3.57	77.68
bjp_ig3402_scaffold_38874 Species: Candidatus Jettenia caeni (50%)	2	1362 bp	38.18	4.63	44.05
bjp_ig3402_scaffold_33153 Species: CG_Desulfob_01 (100%)	2	1552 bp	38.14	4.74	75.58
bjp_ig3402_scaffold_22467 Species: Flexistipes sinusarabici (50%)	2	2129 bp	40.63	3.66	82.57
bjp_ig3402_scaffold_35692 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1462 bp	40.01	5.03	99.32
bjp_ig3402_scaffold_14886 Species: GWC2_Nitrospirae_57_13_curated (50%)	2	2988 bp	37.58	4.42	90.76
bjp_ig3402_scaffold_44551 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1211 bp	35.09	6.69	74.81
bjp_ig3402_scaffold_53583 Species: Thermodesulfovibrio yellowstonii (100%)	2	1030 bp	40.19	4.95	98.45
bjp_ig3402_scaffold_21937 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	2168 bp	38.93	4.84	86.62
bjp_ig3402_scaffold_27066 Species: BJP_IG2158_Nitrospirales_45_240 (50%)	2	1833 bp	40.92	5.89	89.69

Displaying items 451-500 of 758 in total

BJP_Ig3402_Miz_0z3_300_2014_Nitrospirae_40_5

BJP_IG3402_Nitrospirae_40_5

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

BJP_Ig3402_Miz_0z3_300_2014_Nitrospirae_40_5

BJP_IG3402_Nitrospirae_40_5

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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