ggKbase | organisms

Consensus taxonomy: Nitrospirae → Bacteria

Metagenomic Context

Parent: BJP_IG3402_UNK Curated version: BJP_Ig3402_Miz_0z3_300_2014_Nitrospirae_40_5_curated

Properties

Avg. coverage: 4.86 Longest contig: 7.81 Kbp Bin length: 1.40 Mbp GC content: 39.70 %

Contigs count: 758 Features count: 1870 rRNAs count: 0 tRNAs count: 17

Genome completeness

partial RP 35 / 55 MC: 3 BSCG 36 / 51 MC: 2 ASCG 8 / 38 MC: 1

Displaying items 301-350 of 758 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
bjp_ig3402_scaffold_49499 Phylum: Nitrospirae (66.67%)	3	1105 bp	38.37	4.07	56.47
bjp_ig3402_scaffold_15350 Species: GWB2_Nitrospirae_47_37_curated (66.67%)	3	2913 bp	35.84	4.48	79.30
bjp_ig3402_scaffold_25856 Domain: Bacteria (66.67%)	3	1902 bp	40.59	4.65	83.28
bjp_ig3402_scaffold_27401 Species: GWB2_Nitrospirae_47_37_curated (66.67%)	3	1816 bp	38.55	4.46	92.02
bjp_ig3402_scaffold_22044 Species: GWB2_Nitrospirae_47_37_curated (66.67%)	3	2159 bp	40.85	3.89	98.66
bjp_ig3402_scaffold_21253	2	2226 bp	50.58	6.54	10.15
bjp_ig3402_scaffold_19598 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	2382 bp	38.96	4.85	97.86
bjp_ig3402_scaffold_35781 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1459 bp	38.73	3.70	70.94
bjp_ig3402_scaffold_38455 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1375 bp	38.76	4.58	97.96
bjp_ig3402_scaffold_43075 Species: CG_Nitrosp_02 (50%)	2	1246 bp	42.70	5.54	69.58
bjp_ig3402_scaffold_43843 Species: GWB2_Geobacteraceae_52_12_curated (50%)	2	1228 bp	41.94	3.42	99.43
bjp_ig3402_scaffold_33762 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1530 bp	39.28	6.08	92.16
bjp_ig3402_scaffold_30196 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1677 bp	40.97	4.11	66.73
bjp_ig3402_scaffold_42766 Species: RLO_Nitrospinae_39_15 (50%)	2	1255 bp	38.49	5.98	84.38
bjp_ig3402_scaffold_35277 Species: Sulfurihydrogenibium azorense (50%)	2	1476 bp	38.41	5.59	92.89
bjp_ig3402_scaffold_36992 Species: RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated (100%)	2	1420 bp	37.18	4.86	52.18
bjp_ig3402_scaffold_37530 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1402 bp	43.15	4.92	93.30
bjp_ig3402_scaffold_44139 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1221 bp	38.82	3.93	93.12
bjp_ig3402_scaffold_32943 Species: RBG_13_Nitrospirae_41_22_curated (100%)	2	1560 bp	37.37	3.37	60.58
bjp_ig3402_scaffold_37536 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1402 bp	38.73	4.28	100.14
bjp_ig3402_scaffold_32177 Species: Anabaena variabilis (50%)	2	1591 bp	39.85	4.24	93.90
bjp_ig3402_scaffold_34562 Species: RBG_16_Nitrospirae_43_8_curated (50%)	2	1499 bp	36.56	3.60	74.45
bjp_ig3402_scaffold_33521 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1538 bp	41.61	4.39	100.65
bjp_ig3402_scaffold_31131 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1634 bp	36.78	5.60	89.23
bjp_ig3402_scaffold_39379 Species: CG_Nitrosp_02 (50%)	2	1348 bp	42.80	5.34	95.92
bjp_ig3402_scaffold_48898 Species: marine sediment metagenome (100%)	2	1117 bp	58.46	5.24	91.58
bjp_ig3402_scaffold_28260 Species: GWC2_Nitrospirae_57_13_curated (50%)	2	1771 bp	41.84	4.83	67.42
bjp_ig3402_scaffold_26141 Species: RBG_16_Nitrospirae_43_11_curated (100%)	2	1886 bp	43.37	10.02	90.35
bjp_ig3402_scaffold_39126 Species: CG_Nitrosp_02 (50%)	2	1355 bp	41.70	3.10	100.30
bjp_ig3402_scaffold_40966 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1303 bp	36.84	4.72	94.63
bjp_ig3402_scaffold_19111 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	2432 bp	41.08	4.38	71.05
bjp_ig3402_scaffold_39128 Species: RHI_Planctomycetes_42_15 (100%)	2	1355 bp	35.13	2.99	97.86
bjp_ig3402_scaffold_21281 Species: Desulfococcus multivorans (50%)	2	2223 bp	38.46	3.24	75.03
bjp_ig3402_scaffold_18169 Species: Geobacter pickeringii (50%)	2	2535 bp	37.87	4.85	67.10
bjp_ig3402_scaffold_37546 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1402 bp	46.22	4.49	100.14
bjp_ig3402_scaffold_49025 Species: CG_CPR10_01 (100%)	2	1114 bp	37.97	5.39	81.87
bjp_ig3402_scaffold_14491 Species: CSP1_6_Rokubacteria (50%)	2	3060 bp	41.67	4.95	99.51
bjp_ig3402_scaffold_39899 Species: RBG_16_RIF03_38_10_curated (50%)	2	1334 bp	37.41	4.05	91.08
bjp_ig3402_scaffold_50930 Species: CG_Desulfob_01 (50%)	2	1078 bp	35.90	5.01	87.38
bjp_ig3402_scaffold_49026 Species: GWC2_Nitrospirae_57_9_curated (50%)	2	1114 bp	38.78	4.98	100.18
bjp_ig3402_scaffold_18172 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	2534 bp	38.60	6.99	93.53
bjp_ig3402_scaffold_34828 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1491 bp	41.11	4.93	99.80
bjp_ig3402_scaffold_45067 Species: Pyrococcus abyssi (50%)	2	1200 bp	37.58	4.63	91.75
bjp_ig3402_scaffold_53955 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1024 bp	42.58	5.57	100.20
bjp_ig3402_scaffold_41254 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1295 bp	35.60	3.13	85.95
bjp_ig3402_scaffold_29009 Species: Rhodothermus marinus (50%)	2	1734 bp	39.39	5.88	88.24
bjp_ig3402_scaffold_54520 Species: RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated (50%)	2	1015 bp	41.58	3.69	98.42
bjp_ig3402_scaffold_29010	2	1734 bp	42.21	4.15	82.53
bjp_ig3402_scaffold_44930 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1202 bp	36.77	5.49	87.85
bjp_ig3402_scaffold_54779 Species: RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated (50%)	2	1010 bp	37.43	3.56	78.42

Displaying items 301-350 of 758 in total

BJP_Ig3402_Miz_0z3_300_2014_Nitrospirae_40_5

BJP_IG3402_Nitrospirae_40_5

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

BJP_Ig3402_Miz_0z3_300_2014_Nitrospirae_40_5

BJP_IG3402_Nitrospirae_40_5

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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