ggKbase | organisms

Consensus taxonomy: Nitrospirae → Bacteria

Metagenomic Context

Parent: BJP_IG3402_UNK Curated version: BJP_Ig3402_Miz_0z3_300_2014_Nitrospirae_40_5_curated

Properties

Avg. coverage: 4.86 Longest contig: 7.81 Kbp Bin length: 1.40 Mbp GC content: 39.70 %

Contigs count: 758 Features count: 1870 rRNAs count: 0 tRNAs count: 17

Genome completeness

partial RP 35 / 55 MC: 3 BSCG 36 / 51 MC: 2 ASCG 8 / 38 MC: 1

Displaying items 351-400 of 758 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
bjp_ig3402_scaffold_34326 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1508 bp	38.53	3.58	65.05
bjp_ig3402_scaffold_31920 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1601 bp	41.04	5.43	100.25
bjp_ig3402_scaffold_44680 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1208 bp	35.02	5.59	59.60
bjp_ig3402_scaffold_54273 Species: RBG_13_OP8X_37_8_curated (50%)	2	1019 bp	45.93	5.74	95.39
bjp_ig3402_scaffold_45082 Species: RBG_13_Nitrospirae_39_12_curated (50%)	2	1199 bp	49.04	4.63	71.31
bjp_ig3402_scaffold_25140 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1945 bp	38.77	3.78	71.57
bjp_ig3402_scaffold_53203 Species: RBG_13_Nitrospirae_43_8_curated (50%)	2	1037 bp	43.20	4.48	100.10
bjp_ig3402_scaffold_22606 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	2118 bp	43.25	4.60	92.35
bjp_ig3402_scaffold_43374 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1239 bp	39.87	5.93	96.61
bjp_ig3402_scaffold_51837 Species: Geobacter sulfurreducens (50%)	2	1061 bp	39.96	2.97	65.32
bjp_ig3402_scaffold_21303 Species: RIFOXYD12_FULL_Planctomycetes_42_12_curated (50%)	2	2221 bp	36.20	3.51	61.46
bjp_ig3402_scaffold_20871 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	2260 bp	37.48	3.72	87.74
bjp_ig3402_scaffold_44944 Species: Candidatus Magnetobacterium bavaricum (50%)	2	1202 bp	41.85	3.99	91.85
bjp_ig3402_scaffold_45343 Species: GWC2_Nitrospirae_57_13_curated (50%)	2	1193 bp	37.30	4.40	98.83
bjp_ig3402_scaffold_37313 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1410 bp	34.33	4.26	58.94
bjp_ig3402_scaffold_38761 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1365 bp	39.85	4.29	90.99
bjp_ig3402_scaffold_28803 Species: Thioalkalivibrio thiocyanoxidans (50%)	2	1743 bp	37.18	6.11	99.48
bjp_ig3402_scaffold_33810 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1528 bp	36.78	4.71	99.93
bjp_ig3402_scaffold_29540 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1708 bp	39.93	4.83	99.06
bjp_ig3402_scaffold_22868 Species: RBG_13_Nitrospirae_39_12_curated (50%)	2	2098 bp	42.76	8.01	87.80
bjp_ig3402_scaffold_16837 Species: GWA2_Deltaproteobacteria_65_63_curated (50%)	2	2704 bp	39.02	4.72	88.42
bjp_ig3402_scaffold_34341 Species: RBG_13_Nitrospirae_43_8_curated (50%)	2	1508 bp	37.73	4.18	69.63
bjp_ig3402_scaffold_53213 Species: Thermodesulfovibrio yellowstonii (50%)	2	1036 bp	34.85	4.05	95.27
bjp_ig3402_scaffold_51589 Species: RBG_16_Deltaproteobacteria_47_11_curated (50%)	2	1065 bp	37.75	3.94	100.00
bjp_ig3402_scaffold_44953 Species: GWF2_Nitrospirae_44_13_curated (50%)	2	1202 bp	39.60	6.49	93.09
bjp_ig3402_scaffold_35584 Species: Dokdonia donghaensis (50%)	2	1465 bp	36.59	4.61	81.50
bjp_ig3402_scaffold_33561 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1537 bp	37.28	4.98	95.06
bjp_ig3402_scaffold_47913 Species: RBG_16_Deltaproteobacteria_42_7_curated (50%)	2	1137 bp	34.39	4.22	103.96
bjp_ig3402_scaffold_28812 Species: Thermodesulfovibrio yellowstonii (100%)	2	1743 bp	42.91	4.13	77.28
bjp_ig3402_scaffold_35843 Species: RBG_13_Nitrospirae_43_8_curated (50%)	2	1457 bp	39.53	3.50	54.77
bjp_ig3402_scaffold_23382 Species: RBG_19FT_COMBO_Nitrospirae_55_12_curated (50%)	2	2060 bp	43.79	3.42	99.32
bjp_ig3402_scaffold_22366 Species: BJP_IG2158_Nitrospirales_45_240 (100%)	2	2137 bp	38.37	4.14	70.89
bjp_ig3402_scaffold_50965	2	1077 bp	42.90	3.76	72.70
bjp_ig3402_scaffold_22627 Species: CG_Elusi_05 (50%)	2	2116 bp	38.80	4.40	77.27
bjp_ig3402_scaffold_53482 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1032 bp	39.92	3.78	93.60
bjp_ig3402_scaffold_34614 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1497 bp	38.28	3.51	98.40
bjp_ig3402_scaffold_43143 Species: RBG_16_Nitrospirae_43_11_curated (50%)	2	1245 bp	46.67	3.25	85.06
bjp_ig3402_scaffold_39688 Species: GWC2_Nitrospirae_57_13_curated (50%)	2	1340 bp	39.03	4.48	71.19
bjp_ig3402_scaffold_21585 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	2196 bp	40.03	5.26	93.17
bjp_ig3402_scaffold_45882 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1180 bp	38.39	4.32	98.90
bjp_ig3402_scaffold_48698 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1121 bp	37.73	3.61	97.68
bjp_ig3402_scaffold_14285 Species: RHI_Planctomycetes_42_15 (50%)	2	3099 bp	37.27	4.31	68.34
bjp_ig3402_scaffold_41557 Species: GWC2_Nitrospirae_57_9_curated (50%)	2	1286 bp	44.63	4.08	88.02
bjp_ig3402_scaffold_41813 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1280 bp	41.41	6.80	94.22
bjp_ig3402_scaffold_27998 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1783 bp	41.33	3.95	89.18
bjp_ig3402_scaffold_32495 Species: R_Nitrospinae_39_10 (50%)	2	1576 bp	36.74	5.90	35.60
bjp_ig3402_scaffold_43919 Species: RBG_16_Nitrospirae_43_8_curated (50%)	2	1226 bp	42.25	3.55	95.43
bjp_ig3402_scaffold_26201 Species: Ignavibacterium album (50%)	2	1881 bp	34.50	3.83	94.10
bjp_ig3402_scaffold_37345 Species: CG_Desulfob_01 (50%)	2	1409 bp	41.38	4.47	87.51
bjp_ig3402_scaffold_31706 Species: GWB2_Nitrospirae_47_37_curated (100%)	2	1611 bp	41.22	4.84	99.63

Displaying items 351-400 of 758 in total

BJP_Ig3402_Miz_0z3_300_2014_Nitrospirae_40_5

BJP_IG3402_Nitrospirae_40_5

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

BJP_Ig3402_Miz_0z3_300_2014_Nitrospirae_40_5

BJP_IG3402_Nitrospirae_40_5

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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