ggKbase home page

Ig5771_scaffold_1003_curated

Search features with annotation key words

Displaying 16 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5771_scaffold_1003_curated_1
RHI_Planctomycetes_42_15, Planctomycetes, Bacteria

Not on your lists

1..237
DNA (237bp) protein (79aa)
Transposase Tax=planctomycete KSU-1 RepID=I3IMS2_9PLAN
transposase IS4 family protein
Tax=RIFCSPHIGHO2_12_Planctomycetes_42_15_curated
Ig5771_scaffold_1003_curated_2
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

738..1475
DNA (738bp) protein (246aa)
TPR repeat bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
Tax=GWB2_Nitrospirae_47_37_curated
Ig5771_scaffold_1003_curated_3
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

1718..3133
DNA (1416bp) protein (472aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=GWB2_Nitrospirae_47_37_curated
Ig5771_scaffold_1003_curated_4
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

3432..4688
DNA (1257bp) protein (419aa)
proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=GWB2_Nitrospirae_47_37_curated
Ig5771_scaffold_1003_curated_5
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(4742..5296)
DNA (555bp) protein (185aa)
orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A9A061_DESOH
Tax=RBG_13_Nitrospirae_43_8_curated
Ig5771_scaffold_1003_curated_6
CG_Desulfarul_01, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5409..6584)
DNA (1176bp) protein (392aa)
Histidine kinase Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QE05_DESB2
histidine kinase
Tax=CG_Desulfarul_01
Ig5771_scaffold_1003_curated_7
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

6777..8555
DNA (1779bp) protein (593aa)
Penicillin-binding protein 1 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
penicillin-binding protein 1
Tax=GWB2_Nitrospirae_47_37_curated
Ig5771_scaffold_1003_curated_8
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(8730..9392)
DNA (663bp) protein (221aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein bin=GWB2_Nitrospirae_rel_47_37 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
4Fe-4S ferredoxin
Tax=GWB2_Nitrospirae_47_37_curated
Ig5771_scaffold_1003_curated_9
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(9389..9787)
DNA (399bp) protein (133aa)
ArsR family transcriptional regulator bin=GWF2_Nitrospirae_44_13 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
putative transcriptional regulator
Tax=GWF2_Nitrospirae_44_13_curated
Ig5771_scaffold_1003_curated_10
Candidatus Magnetobacterium bavaricum, Candidatus Magnetobacterium, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(10212..12467)
DNA (2256bp) protein (752aa)
Secreted protein containing DUF1566 {ECO:0000313|EMBL:KJU82724.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetobacterium.;" source="Candidatus Magnetobacterium bavaricum.;"
Ig family protein bin=GWC2_Geobacteraceae_55_20 species=Phyllobacterium sp. YR531 genus=Phyllobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
Cna B domain-containing protein
Ig5771_scaffold_1003_curated_11
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

13294..14391
DNA (1098bp) protein (366aa)
P-protein bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=GWB2_Nitrospirae_47_37_curated
Ig5771_scaffold_1003_curated_12
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

14398..15504
DNA (1107bp) protein (369aa)
hisC2; histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=GWB2_Nitrospirae_47_37_curated
Ig5771_scaffold_1003_curated_13
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

15835..16860
DNA (1026bp) protein (342aa)
aroF2; phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=GWB2_Nitrospirae_47_37_curated
Ig5771_scaffold_1003_curated_14
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

16899..17756
DNA (858bp) protein (286aa)
prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=GWB2_Nitrospirae_47_37_curated
Ig5771_scaffold_1003_curated_trna_1
unknown

Not on your lists

17980..18066
DNA (87bp)
transferRNA Ser
Ig5771_scaffold_1003_curated_15
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

comp(18134..19624)
DNA (1491bp) protein (497aa)
magnesium chelatase (EC:6.6.1.1)
Magnesium chelatase Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NFD8_DESAR
Tax=CG_Nitrosp_02
Displaying 16 items

View Taxonomy