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Ig5771_scaffold_2164

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5771_scaffold_2164_1

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comp(2..520)
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JBW5_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH39595.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
Ig5771_scaffold_2164_2
unknown

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665..1462
DNA (798bp) protein (266aa)

This feature has no annotations

Ig5771_scaffold_2164_3
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(1523..2806)
DNA (1284bp) protein (428aa)
translation elongation factor EF-1 subunit alpha (EC:2.7.7.4)
Elongation factor 1-alpha n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KT47_ARCVS
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5771_scaffold_2164_4
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3478..3693)
DNA (216bp) protein (72aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Ig5771_scaffold_2164_5
unknown

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comp(3699..4664)
DNA (966bp) protein (322aa)

This feature has no annotations

Ig5771_scaffold_2164_6
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(4706..5275)
DNA (570bp) protein (190aa)
Putative uncharacterized protein id=5799706 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5771_scaffold_2164_7
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(5285..5611)
DNA (327bp) protein (109aa)
RNA polymerase rpb4; K03051 DNA-directed RNA polymerase subunit F [EC:2.7.7.6] id=18248222 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
RNA polymerase Rpb4
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5771_scaffold_2164_8
unknown

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comp(5633..5884)
DNA (252bp) protein (84aa)

This feature has no annotations

Ig5771_scaffold_2164_9
unknown

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comp(5881..6018)
DNA (138bp) protein (46aa)

This feature has no annotations

Ig5771_scaffold_2164_10
unknown

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comp(6051..6302)
DNA (252bp) protein (84aa)

This feature has no annotations

Ig5771_scaffold_2164_11
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(6314..6595)
DNA (282bp) protein (94aa)
50S ribosomal protein L21e n=1 Tax=Methanoregula boonei (strain 6A8) RepID=RL21_METB6
50S ribosomal protein L21
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5771_scaffold_2164_12
unknown

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comp(6651..7013)
DNA (363bp) protein (121aa)

This feature has no annotations

Ig5771_scaffold_2164_13
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(7124..8365)
DNA (1242bp) protein (414aa)
THUMP domain-containing protein; K07583 tRNA pseudouridine synthase 10 [EC:5.4.99.-] id=5044299 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version! rbh
THUMP domain-containing protein
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5771_scaffold_2164_14

Not on your lists

8428..8916
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AG63_PYRYC
Marine sediment metagenome DNA, contig: S12H4_L01489 {ECO:0000313|EMBL:GAI87608.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Hypothetical protein
Ig5771_scaffold_2164_15
Methanocaldococcus infernus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(9296..9496)
DNA (201bp) protein (67aa)
Ribosome biogenesis protein Nop10 n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VRZ2_METIM
RNA-binding protein Nop10p
Ribosome biogenesis protein Nop10 {ECO:0000256|HAMAP-Rule:MF_00803}; TaxID=573063 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME).;"
Ig5771_scaffold_2164_16
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

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comp(9496..10008)
DNA (513bp) protein (171aa)
Protein belonging to Uncharacterized protein family UPF0157 n=1 Tax=mine drainage metagenome RepID=T0YRX0_9ZZZZ
glutamate-rich protein grpb
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
Ig5771_scaffold_2164_17
unknown

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comp(10005..10517)
DNA (513bp) protein (171aa)

This feature has no annotations

Displaying 17 items

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