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Ig5771_scaffold_2600

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5771_scaffold_2600_1
unknown

Not on your lists

2..124
DNA (123bp) protein (41aa)

This feature has no annotations

Ig5771_scaffold_2600_2
unknown

Not on your lists

comp(105..281)
DNA (177bp) protein (59aa)

This feature has no annotations

Ig5771_scaffold_2600_3
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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616..1407
DNA (792bp) protein (264aa)
30S ribosomal protein S13 n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I732_METCZ
SSU ribosomal protein S13P
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5771_scaffold_2600_4
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists


1577..2143
DNA (567bp) protein (189aa)
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 id=18248037 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
30S ribosomal protein S4
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5771_scaffold_2600_5
unknown

Not on your lists

2191..2499
DNA (309bp) protein (103aa)

This feature has no annotations

Ig5771_scaffold_2600_6
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists


2496..2978
DNA (483bp) protein (161aa)
rps11p; 30S ribosomal protein S11
Putative ribosomal protein S11 id=4922287 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5771_scaffold_2600_7
unknown

Not on your lists

3006..3446
DNA (441bp) protein (147aa)

This feature has no annotations

Ig5771_scaffold_2600_8
unknown

Not on your lists

3468..3824
DNA (357bp) protein (119aa)

This feature has no annotations

Ig5771_scaffold_2600_9
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

3821..4603
DNA (783bp) protein (261aa)
rpoD; DNA-directed RNA polymerase subunit D (EC:2.7.7.6); K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] id=5042091 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
DNA-directed RNA polymerase subunit D (EC:2.7.7.6)
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5771_scaffold_2600_10
unknown

Not on your lists

comp(4616..5056)
DNA (441bp) protein (147aa)

This feature has no annotations

Ig5771_scaffold_2600_11
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists


5727..6092
DNA (366bp) protein (122aa)
50S ribosomal protein L18e n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6UUE5_9EURY
50S ribosomal protein L18
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5771_scaffold_2600_12
unknown

Not on your lists

6103..6399
DNA (297bp) protein (99aa)

This feature has no annotations

Ig5771_scaffold_2600_13
Archaeoglobus profundus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists


6409..6843
DNA (435bp) protein (145aa)
50S ribosomal protein L13 n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RFX9_ARCPA
50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=572546 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 /; Av18).;"
Ig5771_scaffold_2600_14
Methanopyrus kandleri, Methanopyrus, Methanopyrales, Methanopyri, Euryarchaeota, Archaea

Not on your lists


7053..7457
DNA (405bp) protein (135aa)
50S ribosomal protein L32e n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BD83_METIK
50S ribosomal protein L32
50S ribosomal protein L32e; TaxID=190192 species="Archaea; Euryarchaeota; Methanopyri; Methanopyrales; Methanopyraceae; Methanopyrus.;" source="Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC; 100938).;"
Ig5771_scaffold_2600_15
unknown

Not on your lists

7465..7674
DNA (210bp) protein (70aa)

This feature has no annotations

Ig5771_scaffold_2600_16
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

7713..7883
DNA (171bp) protein (57aa)
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5771_scaffold_2600_17
Methanococcus voltae, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

7955..8566
DNA (612bp) protein (204aa)
50S ribosomal protein L19e n=1 Tax=Methanococcus voltae (strain ATCC BAA-1334 / A3) RepID=D7DU92_METV3
50S ribosomal protein L19e
50S ribosomal protein L19e {ECO:0000256|HAMAP-Rule:MF_01475}; TaxID=456320 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus voltae (strain ATCC BAA-1334 / A3).;"
Ig5771_scaffold_2600_18
unknown

Not on your lists

8579..8896
DNA (318bp) protein (106aa)

This feature has no annotations

Ig5771_scaffold_2600_19

Not on your lists


8909..9055
DNA (147bp) protein (49aa)
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 id=5044383 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Displaying 19 items

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