ggKbase home page

Ig5771_scaffold_3303

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5771_scaffold_3303_1
Slackia piriformis, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


comp(81..269)
DNA (189bp) protein (63aa)
50S ribosomal protein L33 n=1 Tax=Slackia piriformis YIT 12062 RepID=K0YJN6_9ACTN
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=742818 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia piriformis YIT 12062.;"
50S ribosomal protein L33P
Ig5771_scaffold_3303_2
Eggerthella sp. CAG:368, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(414..1598)
DNA (1185bp) protein (395aa)
Elongation factor Tu n=1 Tax=Eggerthella sp. CAG:368 RepID=R7BPU8_9ACTN rbh
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1262877 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:368.;"
translation elongation factor Tu rbh
Ig5771_scaffold_3303_trna_4
unknown

Not on your lists

comp(1742..1815)
DNA (74bp)
transferRNA Met
Ig5771_scaffold_3303_trna_3
unknown

Not on your lists

comp(1850..1922)
DNA (73bp)
transferRNA Thr
Ig5771_scaffold_3303_trna_2
unknown

Not on your lists

comp(1961..2042)
DNA (82bp)
transferRNA Tyr
Ig5771_scaffold_3303_3
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(2186..2812)
DNA (627bp) protein (209aa)
Tax=BJP_IG2102_Coriobacteriales_64_17
Ig5771_scaffold_3303_4
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(2841..3254)
DNA (414bp) protein (138aa)
hypothetical protein id=14631049 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
hypothetical protein
Tax=BJP_08E140C01_Coriobacteriales_62_12
Ig5771_scaffold_3303_5
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

3388..4110
DNA (723bp) protein (241aa)
Tax=BJP_IG2102_Coriobacteriales_64_17
Ig5771_scaffold_3303_6
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

4122..5675
DNA (1554bp) protein (518aa)
Adenylate cyclase protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2AIR4_RHIET
putative adenylate cyclase
Tax=BJP_IG2102_Coriobacteriales_64_17
Ig5771_scaffold_3303_trna_1
unknown

Not on your lists

comp(5731..5808)
DNA (78bp)
transferRNA Thr
Ig5771_scaffold_3303_7
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(5837..6424)
DNA (588bp) protein (196aa)
RNA polymerase factor sigma-70 (EC:2.7.7.6)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TWJ9_ALKMQ
Tax=BJP_08E140C01_Coriobacteriales_62_12
Ig5771_scaffold_3303_8
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(6688..7200)
DNA (513bp) protein (171aa)
YacP-like NYN domain protein n=1 Tax=Clostridium difficile F501 RepID=T4C1U4_CLODI
RNA-binding protein
Tax=BJP_IG2102_Coriobacteriales_64_17
Ig5771_scaffold_3303_9
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(7197..7505)
DNA (309bp) protein (103aa)
RNA methyltransferase TrmH family group 3 n=1 Tax=Collinsella sp. CAG:398 RepID=R6Z4K5_9ACTN
TrmH family RNA methyltransferase
Tax=BJP_IG2102_Coriobacteriales_64_17
Displaying 13 items

View Taxonomy