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Ig5771_scaffold_889

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5771_scaffold_889_1
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..595
DNA (594bp) protein (198aa)
TRAP transporter, DctM subunit n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C4R3_DESTA
TRAP transporter, DctM subunit
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
Ig5771_scaffold_889_2
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

595..1479
DNA (885bp) protein (295aa)
Carbon monoxide dehydrogenase medium chain id=1904951 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein
Tax=BJP_IG2069_Desfulfarculales_53_13
Ig5771_scaffold_889_3
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1701..2165
DNA (465bp) protein (155aa)
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C4Q6_DESTA
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein
Tax=RBG_16_Deltaproteobacteria_49_23_curated
Ig5771_scaffold_889_4
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2957..5194
DNA (2238bp) protein (746aa)
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein (EC:1.17.1.4) rbh
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C4Q7_DESTA rbh
Tax=RBG_16_Deltaproteobacteria_49_23_curated
Ig5771_scaffold_889_5
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5310..5657
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C3H9_DESTA
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_49_23_curated
Ig5771_scaffold_889_6
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

comp(5774..6109)
DNA (336bp) protein (112aa)
Predicted protein id=4282392 bin=GWC2_Deltaproteobacteria_42_51 species=Methanosarcina acetivorans genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
Ig5771_scaffold_889_7
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6358..9501
DNA (3144bp) protein (1048aa)
PAS domain S-box n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CCX6_DESTA rbh
PAS domain S-box rbh
Tax=RBG_16_Deltaproteobacteria_49_23_curated
Ig5771_scaffold_889_8
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9535..10422
DNA (888bp) protein (296aa)
Transcriptional regulator, PAS domain linked with LysR-type HTH domain id=4194457 bin=GWC2_Syntrophus__56_31 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
PAS domain S-box
Tax=RBG_16_Deltaproteobacteria_49_23_curated
Ig5771_scaffold_889_9
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10425..10658
DNA (234bp) protein (78aa)
transcriptional regulator n=1 Tax=Omnitrophica bacterium SCGC AAA257-O07 RepID=UPI0003B5BE1E
excisionase family DNA binding domain-containing protein
Tax=RBG_16_Deltaproteobacteria_49_23_curated
Ig5771_scaffold_889_10
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10660..12219
DNA (1560bp) protein (520aa)
multi-sensor signal transduction histidine kinase (EC:2.7.13.3) id=19142 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
signal transduction histidine kinase
Tax=RBG_16_Deltaproteobacteria_49_23_curated
Ig5771_scaffold_889_11
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12216..12587
DNA (372bp) protein (124aa)
two component transcriptional regulator, winged helix family; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP id=19141 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
phoP1; alkaline phosphatase synthesis transcriptional regulatory protein PhoP
Tax=RBG_16_Deltaproteobacteria_47_11_curated
Ig5771_scaffold_889_12
R_Deltaproteobacteria_44_9, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12707..13069
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0M6M1_GRAFK
hypothetical protein
Tax=RIFCSPLOWO2_02_Deltaproteobacteria_44_9_curated
Ig5771_scaffold_889_13
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13162..14379
DNA (1218bp) protein (406aa)
Type II secretion system F domain protein id=1915329 bin=GWD2_Nitrospirae-related_57_8 species=Desulfovibrio fructosivorans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
type II secretion system F domain-containing protein
Tax=RBG_16_Deltaproteobacteria_49_23_curated
Ig5771_scaffold_889_14
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14415..14900
DNA (486bp) protein (162aa)
general secretion pathway protein H
Tax=RBG_16_Deltaproteobacteria_47_11_curated
Ig5771_scaffold_889_15
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14935..15477
DNA (543bp) protein (181aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
Ig5771_scaffold_889_16
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15535..16272
DNA (738bp) protein (246aa)
Putative uncharacterized protein id=4847856 bin=GWC2_Nitrospirae-rel_56_14 species=Aliivibrio salmonicida genus=Aliivibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
MSHA biogenesis protein MshO
Tax=RBG_16_Deltaproteobacteria_49_23_curated
Ig5771_scaffold_889_17
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16352..17152
DNA (801bp) protein (267aa)
Tax=RBG_16_Deltaproteobacteria_48_10_curated
Ig5771_scaffold_889_18
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17232..18944
DNA (1713bp) protein (571aa)
Putative Type IV pilus biogenesis protein PilM (Modular protein) n=1 Tax=Nitrospina gracilis 3/211 RepID=M1ZB62_9BACT
pilM; type IV pilus biogenesis protein PilM
Tax=RBG_16_Deltaproteobacteria_49_23_curated
Ig5771_scaffold_889_19
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19163..19729
DNA (567bp) protein (189aa)
Tax=RBG_16_Deltaproteobacteria_49_23_curated
Ig5771_scaffold_889_20
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19883..20380
DNA (498bp) protein (166aa)
Tax=RBG_16_Deltaproteobacteria_49_23_curated
Ig5771_scaffold_889_21
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20559..22214
DNA (1656bp) protein (552aa)
MSHA biogenesis protein MshL id=2633587 bin=GWC2_Proteo_65_14_Ab886 species=Shewanella violacea genus=Shewanella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
type II secretory pathway subunit PulD
Tax=RBG_16_Deltaproteobacteria_49_23_curated
Ig5771_scaffold_889_22
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22370..23461
DNA (1092bp) protein (364aa)
peptidoglycan-binding domain 1 protein; K02450 general secretion pathway protein A id=14429278 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10 rbh
AAA ATPase
Tax=RBG_16_Deltaproteobacteria_49_23_curated
Ig5771_scaffold_889_23
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23458..24663
DNA (1206bp) protein (402aa)
hypothetical protein; K12600 superkiller protein 3 id=14429279 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein, tetratricopetide domain TPR-1
Tax=RBG_16_Deltaproteobacteria_49_23_curated
Ig5771_scaffold_889_24
unknown

Not on your lists

24709..24783
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 24 items

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