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Ig5772_scaffold_42

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Displaying items 1-30 of 158 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5772_scaffold_42_1
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..520
DNA (519bp) protein (173aa)
Transposase, IS4 family n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AKF4_PELPD
transposase, IS4 family protein
Transposase, IS4 family {ECO:0000313|EMBL:ABK97824.1}; TaxID=338966 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
Ig5772_scaffold_42_2
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

667..1896
DNA (1230bp) protein (410aa)
General secretion pathway protein F id=4936943 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good + rbh
general secretion pathway protein F rbh
Tax=CG_Syntroph_01
Ig5772_scaffold_42_3
GWC2_Syntrophus_56_31_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2022..2462
DNA (441bp) protein (147aa)
General secretion pathway protein G id=4173627 bin=GWC2_Syntrophus__56_31 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
general secretion pathway protein G
Tax=GWC2_Syntrophus_56_31_curated
Ig5772_scaffold_42_4
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2459..2977
DNA (519bp) protein (173aa)
Hypothetical membrane protein id=4936942 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=CG_Syntroph_01
Ig5772_scaffold_42_5
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3014..3847
DNA (834bp) protein (278aa)
Putative uncharacterized protein id=4936927 bin=GWC2_Syntrophobacterales_56_13 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_16_Deltaproteobacteria_58_17_curated
Ig5772_scaffold_42_6
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4270..6045)
DNA (1776bp) protein (592aa)
General secretion pathway protein E id=3823422 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good + rbh
general secretion pathway protein E rbh
Tax=RBG_16_Deltaproteobacteria_58_17_curated
Ig5772_scaffold_42_7
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6055..8349)
DNA (2295bp) protein (765aa)
General secretion pathway protein D n=1 Tax=delta proteobacterium NaphS2 RepID=D8FE25_9DELT rbh
general secretion pathway protein D rbh
Tax=CG_Syntroph_01
Ig5772_scaffold_42_8
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8357..9004)
DNA (648bp) protein (216aa)
Tetratricopeptide repeat protein id=4936921 bin=GWC2_Syntrophobacterales_56_13 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=CG_Syntroph_01
Ig5772_scaffold_42_9
RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9076..9924)
DNA (849bp) protein (283aa)
Peptidoglycan-binding domain 1 protein id=4936923 bin=GWC2_Syntrophobacterales_56_13 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
peptidoglycan-binding domain 1 protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated
Ig5772_scaffold_42_10
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9947..10879)
DNA (933bp) protein (311aa)
Putative general secretion pathway protein C id=4936925 bin=GWC2_Syntrophobacterales_56_13 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
PDZ/DHR/GLGF domain-containing protein
Tax=RBG_16_Deltaproteobacteria_58_17_curated
Ig5772_scaffold_42_11
GWC2_Syntrophus_56_31_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10887..11402)
DNA (516bp) protein (172aa)
Putative uncharacterized protein id=4241687 bin=GWC2_Syntrophus__56_31 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=GWC2_Syntrophus_56_31_curated
Ig5772_scaffold_42_12
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11426..12964)
DNA (1539bp) protein (513aa)
General secretory pathway protein L id=4936931 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good + rbh
general secretory pathway protein L
Tax=RBG_16_Deltaproteobacteria_58_17_curated
Ig5772_scaffold_42_13
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12964..13944)
DNA (981bp) protein (327aa)
Putative uncharacterized protein id=4936933 bin=GWC2_Syntrophobacterales_56_13 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good + rbh
general secretory pathway protein K
Tax=CG_Syntroph_01
Ig5772_scaffold_42_14
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13941..14621)
DNA (681bp) protein (227aa)
Hypothetical membrane protein id=4936940 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=CG_Syntroph_01
Ig5772_scaffold_42_15
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14666..15067)
DNA (402bp) protein (134aa)
Putative uncharacterized protein id=4936941 bin=GWC2_Syntrophobacterales_56_13 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=CG_Syntroph_01
Ig5772_scaffold_42_16
unknown

Not on your lists

comp(15231..15566)
DNA (336bp) protein (112aa)

This feature has no annotations

Ig5772_scaffold_42_17
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15851..16882
DNA (1032bp) protein (344aa)
Bacterial extracellular solute-binding protein, family 7 n=1 Tax=delta proteobacterium NaphS2 RepID=D8EWT6_9DELT rbh
TRAP dicarboxylate transporter subunit DctP rbh
Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
Ig5772_scaffold_42_18
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16908..17393
DNA (486bp) protein (162aa)
Tripartite ATP-independent periplasmic transporter DctQ component n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZTC3_DESOH
tripartite ATP-independent periplasmic transporter DctQ
Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
Ig5772_scaffold_42_19
Smithella sp. F21, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17390..18691
DNA (1302bp) protein (434aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZTC2_DESOH rbh
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KFN40236.1}; TaxID=1538640 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. F21.;"
TRAP dicarboxylate transporter subunit DctM rbh
Ig5772_scaffold_42_20
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18926..19849)
DNA (924bp) protein (308aa)
Ggdef domain protein id=2027084 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
ggdef domain-containing protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5772_scaffold_42_21
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19852..20685)
DNA (834bp) protein (278aa)
Predicted signal transduction protein id=2027085 bin=GWB2_Nitrospirae_rel_47_37 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
HD domain-containing protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5772_scaffold_42_22
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20678..20971)
DNA (294bp) protein (98aa)
Putative uncharacterized protein id=2027086 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Ig5772_scaffold_42_23
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21207..21833)
DNA (627bp) protein (209aa)
Lipolytic enzyme, G-D-S-L family n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BVG7_METCG
G-D-S-L family lipolytic protein
Tax=BJP_IG2102_Syntrophobacterales_60_12
Ig5772_scaffold_42_24
unknown

Not on your lists

comp(21787..21999)
DNA (213bp) protein (71aa)

This feature has no annotations

Ig5772_scaffold_42_25
RBG_16_Deltaproteobacteria_44_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22014..23363)
DNA (1350bp) protein (450aa)
Magnesium transporter n=2 Tax=Chloroflexus RepID=A9WBV0_CHLAA rbh
mgtE: magnesium transporter
Tax=RBG_16_Deltaproteobacteria_44_11_curated
Ig5772_scaffold_42_26
unknown

Not on your lists

comp(23544..23864)
DNA (321bp) protein (107aa)

This feature has no annotations

Ig5772_scaffold_42_27
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24015..25775
DNA (1761bp) protein (587aa)
pyruvate carboxylase biotin carboxylase subunit (EC:6.4.1.1)
Pyruvate carboxylase biotin carboxylase subunit n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LTP0_SYNAS
Tax=BJP_IG2069_Syntrophobacterales_47_18
Ig5772_scaffold_42_28
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25829..26953)
DNA (1125bp) protein (375aa)
LysM domain protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8EWZ2_9DELT rbh
LysM domain protein {ECO:0000313|EMBL:EFK11963.1}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
lytic transglycosylase
Ig5772_scaffold_42_29
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26950..27396)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BY28_NITHN
hypothetical protein
Tax=BJP_IG2102_Syntrophobacterales_60_12
Ig5772_scaffold_42_30
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27490..28443)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NEU9_DESAR rbh
hypothetical protein rbh
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
Displaying items 1-30 of 158 in total

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