ggKbase home page

Ig5772_scaffold_1112

Search features with annotation key words

Displaying 14 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5772_scaffold_1112_1
Acetobacter syzygii, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..189
DNA (189bp) protein (63aa)
Elongation factor Tu n=2 Tax=Magnetospirillum gryphiswaldense RepID=Q6N0C2_9PROT
tufB; Elongation factor Tu (EF-Tu)
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1231343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter syzygii 9H-2.;"
Ig5772_scaffold_1112_trna_1
unknown

Not on your lists

205..277
DNA (73bp)
transferRNA Trp
Ig5772_scaffold_1112_2
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

327..539
DNA (213bp) protein (71aa)
Protein translocase subunit SecE n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TNZ6_TISMK
preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
Ig5772_scaffold_1112_3
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

545..1078
DNA (534bp) protein (178aa)
Transcription termination/antitermination protein NusG n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9S9J6_PHAFV
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1316936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum fulvum MGU-K5.;"
nusG; transcription antitermination protein NusG
Ig5772_scaffold_1112_4
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1221..1652
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AEM9_AZOBR
50S ribosomal protein L11
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
Ig5772_scaffold_1112_5
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1655..2374
DNA (720bp) protein (240aa)
50S ribosomal protein L1 n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z8P7_AZOL4 rbh
rplA; 50S ribosomal protein L1 rbh
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
Ig5772_scaffold_1112_6
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2722..3240
DNA (519bp) protein (173aa)
50S ribosomal protein L10 n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U4C8_9PROT
rplJ; 50S ribosomal subunit protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
Ig5772_scaffold_1112_7
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3292..3672
DNA (381bp) protein (127aa)
50S ribosomal protein L7/L12 n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A5K5_9PROT
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
50S ribosomal protein L12
Ig5772_scaffold_1112_8
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3797..7969
DNA (4173bp) protein (1391aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) rbh
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
DNA-directed RNA polymerase subunit beta n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=RPOB_MAGSA rbh
Ig5772_scaffold_1112_9
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7988..12202
DNA (4215bp) protein (1405aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
DNA-directed RNA polymerase subunit beta' n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AEM3_AZOBR rbh
DNA-directed RNA polymerase subunit beta'
Ig5772_scaffold_1112_10
unknown

Not on your lists

12317..12607
DNA (291bp) protein (97aa)

This feature has no annotations

Ig5772_scaffold_1112_11
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12586..12957
DNA (372bp) protein (124aa)
30S ribosomal protein S12 n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U4D6_9PROT
rpsL; 30S ribosomal subunit protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
Ig5772_scaffold_1112_12
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12973..13443
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI00039C1BC8
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
rpsG; 30S ribosomal protein S7
Ig5772_scaffold_1112_13
Candidatus Paracaedibacter acanthamoebae, Candidatus Paracaedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13473..13589
DNA (117bp) protein (39aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GH09_9SPHN
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=91604 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Candidatus Paracaedibacter.;" source="Candidatus Paracaedibacter acanthamoebae.;"
Displaying 14 items

View Taxonomy