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Ig5772_scaffold_859

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Displaying items 1-30 of 42 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5772_scaffold_859_1
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1673)
DNA (1671bp) protein (557aa)
GTP-binding protein TypA n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y3M3_9PROT
GTP-binding protein TypA {ECO:0000313|EMBL:EGX99882.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
typA; GTP-binding protein typA/BipA
Ig5772_scaffold_859_2
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1681..2679)
DNA (999bp) protein (333aa)
Putative carbohydrate/purine kinase {ECO:0000313|EMBL:CBS88267.1}; EC=2.7.1.- {ECO:0000313|EMBL:CBS88267.1};; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
Putative carbohydrate/purine kinase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z773_AZOL4
putative carbohydrate/purine kinase
Ig5772_scaffold_859_3
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2842..3516
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z772_AZOL4
Uncharacterized protein {ECO:0000313|EMBL:KJS45186.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
hypothetical protein
Ig5772_scaffold_859_4
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3547..4125
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2IK86_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE70556.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hypothetical protein
Ig5772_scaffold_859_5
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4154..4564
DNA (411bp) protein (137aa)
Uncharacterized protein {ECO:0000313|EMBL:CDO59801.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
Ig5772_scaffold_859_6
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4561..5205)
DNA (645bp) protein (215aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
Endonuclease III n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RYK7_9SPHN
endonuclease III
Ig5772_scaffold_859_7
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5202..7076)
DNA (1875bp) protein (625aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8APZ9_AZOBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIB13758.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
Ig5772_scaffold_859_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7073..7594)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W3W8_MAGSA
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Ig5772_scaffold_859_9
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7646..8140
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B6ABDC
Uncharacterized protein {ECO:0000313|EMBL:EGY01916.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
hypothetical protein
Ig5772_scaffold_859_10
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8110..8907)
DNA (798bp) protein (266aa)
dapB; Dihydrodipicolinate reductase (DHPR) (EC:1.17.1.8)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
Dihydrodipicolinate reductase (DHPR) n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F3Z8_9PROT
Ig5772_scaffold_859_11
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8921..9658)
DNA (738bp) protein (246aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VKN1_9RHOB
Short-chain dehydrogenase {ECO:0000313|EMBL:KJB93208.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
short-chain dehydrogenase/reductase family oxidoreductase
Ig5772_scaffold_859_12
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9655..11004)
DNA (1350bp) protein (450aa)
Putative oxidoreductase n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CIF2_9RHOB
FAD-linked oxidase {ECO:0000313|EMBL:KJB93207.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
FAD linked oxidase domain-containing protein
Ig5772_scaffold_859_13
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11001..11864)
DNA (864bp) protein (288aa)
UbiA prenyltransferase family protein n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=A6QAG4_SULNB
Uncharacterized protein {ECO:0000313|EMBL:KJV09873.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
UbiA prenyltransferase family protein
Ig5772_scaffold_859_14
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11908..13182)
DNA (1275bp) protein (425aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI000361529D rbh
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KJB95339.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
TRAP dicarboxylate transporter subunit DctM rbh
Ig5772_scaffold_859_15
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13201..13710)
DNA (510bp) protein (170aa)
TRAP transporter, DctQ-like membrane protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RRG0_9PROT
tripartite ATP-independent periplasmic transporter DctQ
Tax=CG_Rhodocyc_01
Ig5772_scaffold_859_16
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13707..14687)
DNA (981bp) protein (327aa)
Candidate periplasmic component n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y497_RAMTT
Uncharacterized protein {ECO:0000313|EMBL:KFG67574.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
dctP; periplasmic protein
Ig5772_scaffold_859_17
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14718..15884)
DNA (1167bp) protein (389aa)
Mandelate racemase/muconate lactonizing enzyme protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A7Z9_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:KFG67575.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
Mandelate racemase/muconate lactonizing protein
Ig5772_scaffold_859_18
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15985..16884
DNA (900bp) protein (300aa)
LysR substrate binding domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A7Z7_9PROT
LysR substrate binding domain protein {ECO:0000313|EMBL:EHL96131.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
transcriptional regulator, LysR family
Ig5772_scaffold_859_19
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16900..17739)
DNA (840bp) protein (280aa)
Chaperone protein DnaJ n=1 Tax=alpha proteobacterium BAL199 RepID=A8U066_9PROT
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
dnaJ; chaperone protein DnaJ
Ig5772_scaffold_859_20
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17969..19834)
DNA (1866bp) protein (622aa)
Chaperone protein DnaK n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A0H6_STAND
chaperone protein DnaK
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
Ig5772_scaffold_859_21
unknown

Not on your lists

20234..20674
DNA (441bp) protein (147aa)

This feature has no annotations

Ig5772_scaffold_859_22
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

comp(20676..21191)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Leptospira broomii serovar Hurstbridge str. 5399 RepID=T0GLT5_9LEPT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
Ig5772_scaffold_859_23
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21264..21878)
DNA (615bp) protein (205aa)
Protein GrpE n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z4D1_AZOL4
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
grpE; molecular chaperone
Ig5772_scaffold_859_24
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21960..23141)
DNA (1182bp) protein (394aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IVK1_RHOCS rbh
hrcA; heat-inducible transcription repressor rbh
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Ig5772_scaffold_859_25
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23236..23967
DNA (732bp) protein (244aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=1316936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum fulvum MGU-K5.;"
rph; ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9SBY5_PHAFV rbh
Ig5772_scaffold_859_26
RIFOXYA1_FULL_Brevundimonas_67_7_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24104..24469)
DNA (366bp) protein (122aa)
Tax=RIFOXYA1_FULL_Brevundimonas_67_7_curated
Ig5772_scaffold_859_27
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24522..25697
DNA (1176bp) protein (392aa)
Oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JV14_9PROT rbh
Coproporphyrinogen III oxidase {ECO:0000313|EMBL:KGM34286.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
coproporphyrinogen III oxidase
Ig5772_scaffold_859_28
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25694..25963)
DNA (270bp) protein (90aa)
Extracellular ligand-binding receptor n=1 Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KLL9_MICAA
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:EWY40548.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
conserved exported protein of unknown function[Include Receptor family ligand binding region]
Ig5772_scaffold_859_29
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25920..26525)
DNA (606bp) protein (202aa)
Extracellular ligand-binding receptor n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GWI5_SPHAL
extracellular ligand-binding receptor
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
Ig5772_scaffold_859_30
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26961..27863
DNA (903bp) protein (301aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
Putative S-adenosylmethionine-dependent methyltransferase, YraL family n=1 Tax=Microvirga sp. WSM3557 RepID=I4YUC0_9RHIZ
hypothetical protein
Displaying items 1-30 of 42 in total

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