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Ig5772_scaffold_78

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Displaying items 1-30 of 118 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5772_scaffold_78_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..227)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000377D4DF
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
Ig5772_scaffold_78_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(313..1068)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E213C rbh
flagellar biosynthetic fliR transmembrane protein rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Ig5772_scaffold_78_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1071..1325)
DNA (255bp) protein (85aa)
flagellar biosynthesis protein FliQ n=1 Tax=Thiobacillus thioparus RepID=UPI00037AAAAF
flagellar biosynthetic protein FliQ
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Ig5772_scaffold_78_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1325..2053)
DNA (729bp) protein (243aa)
flagellar biosynthesis protein FliP n=1 Tax=Thiobacillus denitrificans RepID=UPI00035C1B8F rbh
fliP; flagellar biosynthesis protein FliP rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Ig5772_scaffold_78_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2050..2394)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000365C89C
flagellar protein FliO
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Ig5772_scaffold_78_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2387..2848)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381CEF2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97046.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Ig5772_scaffold_78_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2848..3297)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035C7F22
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97045.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Ig5772_scaffold_78_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3294..4691)
DNA (1398bp) protein (466aa)
flagella ATPase FliI (EC:3.6.3.15) rbh
Flagella ATPase FliI {ECO:0000313|EMBL:AAZ97044.1}; EC=3.6.3.15 {ECO:0000313|EMBL:AAZ97044.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
ATP synthase n=1 Tax=Thiobacillus thioparus RepID=UPI00037BC7FC rbh
Ig5772_scaffold_78_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4688..5293)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003769EBF rbh
flagellar assembly protein FliH rbh
Flagellar assembly protein FliH {ECO:0000313|EMBL:AAZ97043.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Ig5772_scaffold_78_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5290..6255)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003764A92 rbh
flagellar motor switch protein FliG rbh
Flagellar motor switch protein FliG {ECO:0000313|EMBL:AAZ97042.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Ig5772_scaffold_78_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6252..7544)
DNA (1293bp) protein (431aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000375CDF4 rbh
flagellar biosynthesis/type III secretory pathway lipoprotein FliF rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Ig5772_scaffold_78_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7786..8238)
DNA (453bp) protein (151aa)
phosphohistidine phosphatase n=1 Tax=Thiobacillus thioparus RepID=UPI00036C0579
phosphohistidine phosphatase, SixA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Ig5772_scaffold_78_13
Methylophilaceae bacterium 11, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8388..9266
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Methylotenera sp. 1P/1 RepID=UPI00036C3892
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EUJ10583.1}; TaxID=1101195 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacterium 11.;"
hypothetical protein
Ig5772_scaffold_78_14
Methylophilaceae bacterium 11, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9241..11166)
DNA (1926bp) protein (642aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1101195 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacterium 11.;"
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036B1085 rbh
integral membrane sensor signal transduction histidine kinase rbh
Ig5772_scaffold_78_15
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11176..12816)
DNA (1641bp) protein (547aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003676094 rbh
Putative LysM motif protein
Putative LysM motif protein {ECO:0000313|EMBL:CAZ90105.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Ig5772_scaffold_78_16
Methylophilaceae bacterium 11, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12819..13526)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003690B53 rbh
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:EUJ10586.1}; TaxID=1101195 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacterium 11.;"
winged helix family two component transcriptional regulator
Ig5772_scaffold_78_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13574..15160)
DNA (1587bp) protein (529aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037A0594 rbh
adenylate cyclase rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Ig5772_scaffold_78_18
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15225..17291
DNA (2067bp) protein (689aa)
polyphosphate kinase (EC:2.7.4.1) rbh
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
polyphosphate kinase n=1 Tax=Thiobacillus thioparus RepID=UPI000362B044 rbh
Ig5772_scaffold_78_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17374..19272
DNA (1899bp) protein (633aa)
heat shock protein 90 n=1 Tax=Thiobacillus thioparus RepID=UPI0003656435 rbh
heat shock protein 90 rbh
Tax=GWE1_Thiobacillus_62_9_curated
Ig5772_scaffold_78_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19311..19748
DNA (438bp) protein (146aa)
Putative uncharacterized protein id=1357130 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
Ig5772_scaffold_78_21
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19752..20600
DNA (849bp) protein (283aa)
rRNA (guanine-N1-)-methyltransferase (EC:2.1.1.51); K00563 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] id=12495457 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
rRNA (guanine-N1-)-methyltransferase rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Ig5772_scaffold_78_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20701..21492
DNA (792bp) protein (264aa)
Glutathione S-transferase family protein id=1320585 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
glutathione S-transferase rbh
Tax=GWE1_Thiobacillus_62_9_curated
Ig5772_scaffold_78_23
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

Not on your lists

21575..21850
DNA (276bp) protein (92aa)
hypothetical protein id=12497310 bin=THIO_MID species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Putative uncharacterized protein {ECO:0000313|EMBL:EEF27148.1}; Flags: Fragment;; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus.;" source="Ricinus communis (Castor bean).;"
hypothetical protein
Ig5772_scaffold_78_24
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21847..23328)
DNA (1482bp) protein (494aa)
Ppx/GppA phosphatase (EC:3.6.1.11); K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] id=12497311 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Ppx/GppA phosphatase (EC:3.6.1.11)
Tax=GWE1_Thiobacillus_62_9_curated
Ig5772_scaffold_78_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23325..24563)
DNA (1239bp) protein (413aa)
membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000361BC2F
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Ig5772_scaffold_78_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24570..25487)
DNA (918bp) protein (306aa)
CobD/CbiB family protein (EC:6.3.1.10); K02227 adenosylcobinamide-phosphate synthase [EC:6.3.1.10] id=12497313 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
CobD/CbiB family protein (EC:6.3.1.10) rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Ig5772_scaffold_78_27
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25487..26014)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037A7778 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96996.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Ig5772_scaffold_78_28
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26128..27075
DNA (948bp) protein (316aa)
beta-lactamase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036BABC1 rbh
beta lactamase rbh
Beta lactamase {ECO:0000313|EMBL:AAZ96994.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Ig5772_scaffold_78_29
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27076..27825)
DNA (750bp) protein (250aa)
permease n=1 Tax=Thiobacillus denitrificans RepID=UPI000376458D rbh
hypothetical protein rbh
Uncharacterized conserved membrane protein {ECO:0000313|EMBL:AAZ96991.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Ig5772_scaffold_78_30
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27833..28144)
DNA (312bp) protein (104aa)
hypothetical protein; K09137 hypothetical protein id=12493197 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96990.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Displaying items 1-30 of 118 in total

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