ggKbase home page

Ig5772_scaffold_906

Search features with annotation key words

Displaying 17 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5772_scaffold_906_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..2529
DNA (2529bp) protein (843aa)
Heavy metal efflux pump CzcA n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJ81_THIDA
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:AAZ97286.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
heavy metal efflux pump CzcA
Ig5772_scaffold_906_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2529..2645
DNA (117bp) protein (39aa)
Heavy metal efflux pump CzcA id=1367720 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
CzcA family heavy metal RND efflux protein
Tax=GWE1_Thiobacillus_62_9_curated
Ig5772_scaffold_906_3
unknown

Not on your lists

comp(2734..3216)
DNA (483bp) protein (161aa)

This feature has no annotations

Ig5772_scaffold_906_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3353..3793
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037CB7BA
helix-turn-helix domain protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Ig5772_scaffold_906_5
unknown

Not on your lists

3793..4110
DNA (318bp) protein (106aa)

This feature has no annotations

Ig5772_scaffold_906_6
Providencia sneebia, Providencia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4175..5953)
DNA (1779bp) protein (593aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1141660 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Providencia.;" source="Providencia sneebia DSM 19967.;"
UPI0003A1843C related cluster n=1 Tax=unknown RepID=UPI0003A1843C rbh
ATP-dependent DNA helicase UvrD/PcrA rbh
Ig5772_scaffold_906_7
Xenorhabdus nematophila, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5950..7701)
DNA (1752bp) protein (584aa)
ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Enterobacter aerogenes EA1509E RepID=L8BRK1_ENTAE rbh
ATP-dependent endonuclease of the OLD family-like protein rbh
OLD family TOPRIM nucleotidyl transferase/hydrolase domain protein {ECO:0000313|EMBL:CEE91184.1}; TaxID=1437825 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus nematophila str. Anatoliense.;"
Ig5772_scaffold_906_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7712..8581)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PP60_9ZZZZ rbh
conserved protein of unknown function
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Ig5772_scaffold_906_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8578..9396)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PP59_9ZZZZ rbh
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Ig5772_scaffold_906_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9894..10400
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003824AE0 rbh
DNA repair protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Ig5772_scaffold_906_11
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10971..11798
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036AE251 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP47699.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
Ig5772_scaffold_906_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12645..12950
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000363A93E
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Ig5772_scaffold_906_13
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13184..13528
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000362200E
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
Ig5772_scaffold_906_14
Aeromonas media, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13734..14654)
DNA (921bp) protein (307aa)
Integrase catalytic subunit n=1 Tax=Alcanivorax hongdengensis A-11-3 RepID=L0W7M6_9GAMM rbh
Integrase catalytic region
Integrase catalytic region {ECO:0000313|EMBL:AHX59485.1}; TaxID=1208104 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas media WS.;"
Ig5772_scaffold_906_15
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15379..16554
DNA (1176bp) protein (392aa)
Cytochrome c peroxidase family protein n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q606V7_METCA rbh
cytochrome c peroxidase rbh
Cytochrome c peroxidase family protein {ECO:0000313|EMBL:AAU91819.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
Ig5772_scaffold_906_16
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17106..17510
DNA (405bp) protein (135aa)
Transcriptional regulator, ArsR family n=1 Tax=Acidithiobacillus ferrooxidans (strain ATCC 53993) RepID=B5EKA7_ACIF5
arsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ACH82467.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
Ig5772_scaffold_906_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17510..19354
DNA (1845bp) protein (615aa)
Heavy metal translocating P-type ATPase id=1332418 bin=GWE1_T_denit_62_9 species=Acidithiobacillus ferrooxidans genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
heavy metal translocating P-type ATPase rbh
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 17 items

View Taxonomy