ggKbase home page
Advanced Search
Search Help

Ig5772_Miz_1z4_300_2015_Bacteria_68_5_Firmicutes-like

09MI21_z4_2015_Bacteria_68_5
In projects: 09MI21_z4_2015  |  mizunami_genomes

Consensus taxonomy: Bacteria

Taxonomy override: Firmicutes

Metagenomic Context

Parent: ig5772_UNK

Properties

Avg. coverage: 4.88 Longest contig: 7.24 Kbp Bin length: 1.30 Mbp GC content: 67.61 %
Contigs count: 646 Features count: 1690 rRNAs count: 0 tRNAs count: 12

Genome completeness

partial RP 22 / 55 MC: 1 BSCG 26 / 51 MC: 4 ASCG 9 / 38

Description

Intersect_Ig5772.010_&_Ig5772.049 contains different phylum, but each contig seems to be related to Firmicutes (YA)

Displaying items 301-350 of 646 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
Ig5772_scaffold_13554
Species: Halanaerobium saccharolyticum (50%)
2 1557 bp 66.28 5.20 100.00
Ig5772_scaffold_13299
Species: Thermincola potens (50%)
2 1584 bp 68.88 4.83 99.62
Ig5772_scaffold_13555
Species: RBG_16_Zixibacteria_43_9_curated (50%)
2 1557 bp 70.33 4.91 100.38
Ig5772_scaffold_20516
Species: Desulfotomaculum carboxydivorans (50%)
2 1040 bp 68.65 3.61 98.65
Ig5772_scaffold_14837
Species: S_Thermoanaerobacterales_50_218 (50%)
2 1427 bp 65.87 4.84 80.52
Ig5772_scaffold_13302
Species: R_Rokubacteria_73_56 (50%)
2 1584 bp 68.94 4.73 92.61
Ig5772_scaffold_15367
Species: Dethiobacter alkaliphilus (50%)
2 1378 bp 65.75 5.22 80.77
Ig5772_scaffold_8440
Species: [Clostridium] clariflavum (50%)
2 2365 bp 70.49 4.63 100.09
Ig5772_scaffold_7905
Species: Desulfotomaculum acetoxidans (50%)
2 2509 bp 69.43 5.20 97.57
Ig5772_scaffold_13049
Species: RBG_19FT_COMBO_Syntrophobacterales_59_10_curated (50%)
2 1610 bp 66.34 6.80 54.22
Ig5772_scaffold_17612
Species: BJP_08E140C01_Elusimicrobia_64_11 (50%)
2 1212 bp 70.05 4.21 99.75
Ig5772_scaffold_10917
Species: Alicyclobacillus acidocaldarius (50%)
2 1890 bp 66.98 4.05 99.68
Ig5772_scaffold_11214
Species: Gloeobacter violaceus (50%)
2 1847 bp 68.65 4.14 87.22
Ig5772_scaffold_9286
Species: Acetonema longum (50%)
2 2181 bp 67.35 5.16 90.23
Ig5772_scaffold_19896
Species: Rubrobacter radiotolerans (50%)
2 1072 bp 66.04 5.32 99.63
Ig5772_scaffold_20528
Species: CSP1_3_Armatimonadetes (50%)
2 1040 bp 67.69 4.33 73.27
Ig5772_scaffold_16498
Species: RBG_16_Zixibacteria_50_21_curated (50%)
2 1293 bp 66.59 4.41 79.58
Ig5772_scaffold_20531
Species: Thioflavicoccus mobilis (50%)
2 1039 bp 68.82 4.91 96.44
Ig5772_scaffold_4859
Species: Desulfotomaculum kuznetsovii (50%)
2 3780 bp 69.18 5.48 96.03
Ig5772_scaffold_17621
Species: Candidatus Desulforudis audaxviator (50%)
2 1212 bp 67.90 4.70 65.10
Ig5772_scaffold_7406
Species: Acetohalobium arabaticum (50%)
2 2656 bp 68.11 5.31 81.66
Ig5772_scaffold_14086
Species: Anaerolinea thermophila (50%)
2 1502 bp 70.64 5.49 93.68
Ig5772_scaffold_11479
Species: CG_Anaero_02 (50%)
2 1809 bp 67.83 4.31 99.17
Ig5772_scaffold_15640
Species: Geobacter sp. M21 (50%)
2 1353 bp 67.78 3.55 96.45
Ig5772_scaffold_9553
Species: Thermincola potens (50%)
2 2122 bp 69.79 5.16 99.39
Ig5772_scaffold_15132
Species: BJP_IG2103_Rhodocyclales_63_50 (50%)
2 1398 bp 68.74 4.08 96.14
Ig5772_scaffold_11740
Species: Desulfotomaculum gibsoniae (50%)
2 1773 bp 68.25 4.40 96.95
Ig5772_scaffold_9300
Species: Desulfotomaculum carboxydivorans (50%)
2 2177 bp 67.34 4.13 94.81
Ig5772_scaffold_9558 2 2121 bp 65.82 4.88 85.29
Ig5772_scaffold_10934
Species: Desulfotomaculum gibsoniae (50%)
2 1887 bp 65.45 5.01 96.82
Ig5772_scaffold_12241
Species: CSP1_4_Chloroflexi (50%)
2 1700 bp 67.76 6.53 99.00
Ig5772_scaffold_13076
Species: Actinotalea fermentans (50%)
2 1607 bp 66.77 3.92 99.50
Ig5772_scaffold_20036
Species: Natranaerobius thermophilus (50%)
2 1064 bp 68.05 4.37 97.27
Ig5772_scaffold_9054
Species: Halanaerobium praevalens (50%)
2 2233 bp 66.55 4.97 93.64
Ig5772_scaffold_20550
Species: BJP_08E140C01_10KDA_Sphingopyxis_64_55 (100%)
2 1039 bp 72.76 4.62 100.19
Ig5772_scaffold_12503 2 1671 bp 66.67 4.13 94.08
Ig5772_scaffold_21255
Species: Azorhizobium caulinodans (50%)
2 1003 bp 72.98 4.19 95.71
Ig5772_scaffold_14362
Species: Ammonifex degensii (50%)
2 1476 bp 66.80 3.46 100.00
Ig5772_scaffold_16013
Species: Candidatus Desulforudis audaxviator (50%)
2 1326 bp 67.19 5.20 81.00
Ig5772_scaffold_15406
Species: Thermosinus carboxydivorans (50%)
2 1374 bp 68.12 4.59 100.00
Ig5772_scaffold_15407
Species: Symbiobacterium thermophilum (50%)
2 1374 bp 68.20 5.90 87.99
Ig5772_scaffold_7435
Species: BJP_08E140C01_Elusimicrobia_64_11 (50%)
2 2643 bp 68.10 5.79 97.16
Ig5772_scaffold_6235
Species: Caldanaerobacter subterraneus (50%)
2 3063 bp 67.55 5.44 85.90
Ig5772_scaffold_10444 2 1963 bp 66.63 4.74 94.14
Ig5772_scaffold_7183
Species: Dethiobacter alkaliphilus (50%)
2 2729 bp 69.62 4.56 95.42
Ig5772_scaffold_10703
Species: Natranaerobius thermophilus (100%)
2 1923 bp 67.65 5.77 93.76
Ig5772_scaffold_12010
Species: RLO_Gemmatimonadetes_68_9 (50%)
2 1733 bp 64.22 4.76 86.38
Ig5772_scaffold_19427
Species: Desulfotomaculum hydrothermale (50%)
2 1100 bp 69.91 4.23 96.55
Ig5772_scaffold_6499
Species: CG_Dehalo_02 (50%)
2 2962 bp 67.42 6.79 96.62
Ig5772_scaffold_13870
Species: Thermaerobacter subterraneus (50%)
2 1521 bp 68.44 6.41 62.72
Displaying items 301-350 of 646 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.