ggKbase home page
Advanced Search
Search Help

Ig5772_Miz_1z4_300_2015_Bacteria_68_5_Firmicutes-like

09MI21_z4_2015_Bacteria_68_5
In projects: 09MI21_z4_2015  |  mizunami_genomes

Consensus taxonomy: Bacteria

Taxonomy override: Firmicutes

Metagenomic Context

Parent: ig5772_UNK

Properties

Avg. coverage: 4.88 Longest contig: 7.24 Kbp Bin length: 1.30 Mbp GC content: 67.61 %
Contigs count: 646 Features count: 1690 rRNAs count: 0 tRNAs count: 12

Genome completeness

partial RP 22 / 55 MC: 1 BSCG 26 / 51 MC: 4 ASCG 9 / 38

Description

Intersect_Ig5772.010_&_Ig5772.049 contains different phylum, but each contig seems to be related to Firmicutes (YA)

Displaying items 351-400 of 646 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
Ig5772_scaffold_16031
Species: Paenibacillus sp. Y412MC10 (50%)
2 1325 bp 66.49 4.98 84.68
Ig5772_scaffold_13873
Species: Thermaerobacter subterraneus (50%)
2 1521 bp 69.36 2.37 99.41
Ig5772_scaffold_13362
Species: R_NC10_66_22 (50%)
2 1577 bp 67.41 6.37 99.87
Ig5772_scaffold_17667
Species: Thermosediminibacter oceani (50%)
2 1209 bp 68.98 5.09 100.50
Ig5772_scaffold_14900
Species: Sphingopyxis fribergensis (50%)
2 1421 bp 70.94 4.64 100.07
Ig5772_scaffold_11525
Species: Mahella australiensis (50%)
2 1804 bp 65.74 3.91 63.19
Ig5772_scaffold_20837
Species: Microcystis aeruginosa (50%)
2 1024 bp 65.82 4.69 65.04
Ig5772_scaffold_12790
Species: R_Omnitrophica_44_11 (50%)
2 1637 bp 68.11 4.58 100.79
Ig5772_scaffold_7711
Species: BJP_08E140C01_Clostridiales_46_19 (50%)
2 2563 bp 66.02 5.27 84.04
Ig5772_scaffold_6768
Species: Desulfosporosinus orientis (50%)
2 2870 bp 65.40 4.55 98.99
Ig5772_scaffold_11785
Species: Candidatus Desulforudis audaxviator (50%)
2 1764 bp 67.35 4.68 88.10
Ig5772_scaffold_21289
Species: BJP_08E140C01_10KDA_Sphingopyxis_64_55 (50%)
2 1001 bp 68.93 4.35 92.31
Ig5772_scaffold_11019 2 1876 bp 67.70 6.00 77.56
Ig5772_scaffold_15180
Species: Carboxydothermus hydrogenoformans (50%)
2 1393 bp 67.05 4.95 95.19
Ig5772_scaffold_13628
Species: Symbiobacterium thermophilum (50%)
2 1548 bp 68.15 5.14 75.39
Ig5772_scaffold_12284
Species: Acidaminococcus sp. CAG:542 (50%)
2 1695 bp 68.08 4.78 95.04
Ig5772_scaffold_15437
Species: Mycobacterium kansasii (50%)
2 1371 bp 67.61 4.05 85.34
Ig5772_scaffold_16301
Species: RIFOXYA2_FULL_Elusimicrobia_53_38_curated (100%)
2 1306 bp 66.46 5.05 100.15
Ig5772_scaffold_19189
Species: bacterium YEK0313 (50%)
2 1113 bp 67.03 4.58 70.35
Ig5772_scaffold_6773
Species: Thermosediminibacter oceani (100%)
2 2867 bp 69.27 4.50 100.35
Ig5772_scaffold_12541
Species: Ktedonobacter racemifer (50%)
2 1667 bp 66.05 4.32 98.62
Ig5772_scaffold_21293
Species: Thermobaculum terrenum (50%)
2 1001 bp 70.63 4.50 100.40
Ig5772_scaffold_16304
Species: BJP_08E140C01_10KDA_Sphingopyxis_64_55 (100%)
2 1306 bp 71.82 3.91 100.15
Ig5772_scaffold_14147
Species: Caldatribacterium saccharofermentans (50%)
2 1496 bp 66.11 3.71 95.66
Ig5772_scaffold_19707
Species: [Clostridium] stercorarium (50%)
2 1083 bp 65.74 3.46 98.34
Ig5772_scaffold_16052
Species: Moorella thermoacetica (50%)
2 1323 bp 66.44 2.95 99.55
Ig5772_scaffold_12804
Species: Desulfotomaculum kuznetsovii (50%)
2 1634 bp 67.32 4.77 100.06
Ig5772_scaffold_14662
Species: RBG_19FT_COMBO_Armatimonadetes_69_19_curated (50%)
2 1446 bp 65.56 4.46 98.34
Ig5772_scaffold_12294
Species: CG_Dehalo_01 (50%)
2 1693 bp 68.04 3.10 99.23
Ig5772_scaffold_18318
Species: Caldisalinibacter kiritimatiensis (50%)
2 1167 bp 64.52 4.50 102.57
Ig5772_scaffold_16567
Species: Cystobacter fuscus (50%)
2 1288 bp 69.18 4.43 96.89
Ig5772_scaffold_13896
Species: Moorella thermoacetica (50%)
2 1519 bp 66.75 5.53 60.43
Ig5772_scaffold_10992
Species: RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated (50%)
2 1880 bp 70.16 5.43 98.46
Ig5772_scaffold_12040
Species: Symbiobacterium thermophilum (50%)
2 1728 bp 65.51 5.12 84.90
Ig5772_scaffold_20856
Species: Moorella thermoacetica (100%)
2 1023 bp 66.86 5.13 91.20
Ig5772_scaffold_9105
Species: Dethiobacter alkaliphilus (50%)
2 2221 bp 67.40 5.27 108.20
Ig5772_scaffold_20089
Species: Streptomyces bingchenggensis (50%)
2 1062 bp 67.89 4.10 95.20
Ig5772_scaffold_7218
Species: Carboxydothermus hydrogenoformans (50%)
2 2717 bp 69.75 5.02 99.48
Ig5772_scaffold_6530
Species: Desulfotomaculum kuznetsovii (50%)
2 2952 bp 65.62 3.91 97.05
Ig5772_scaffold_20092
Species: Clostridiaceae bacterium BRH_c20a (50%)
2 1061 bp 64.56 3.82 92.46
Ig5772_scaffold_12813
Species: Rubrivivax gelatinosus (100%)
2 1633 bp 71.22 4.59 94.06
Ig5772_scaffold_19978
Species: Desulfovibrio sp. U5L (50%)
2 1068 bp 64.98 3.09 83.99
Ig5772_scaffold_9630
Species: Thermosinus carboxydivorans (50%)
2 2107 bp 66.11 5.13 77.31
Ig5772_scaffold_5128
Species: Thermaerobacter subterraneus (50%)
2 3611 bp 65.72 4.86 99.11
Ig5772_scaffold_16330
Species: Synechococcus sp. JA-2-3B'a(2-13) (50%)
2 1304 bp 68.10 3.34 81.44
Ig5772_scaffold_12314
Species: Caldisalinibacter kiritimatiensis (50%)
2 1691 bp 64.22 4.88 71.67
Ig5772_scaffold_15724
Species: Lactobacillus rhamnosus (50%)
2 1346 bp 67.38 4.90 96.51
Ig5772_scaffold_13916
Species: Thermaerobacter subterraneus (50%)
2 1518 bp 67.98 4.05 94.07
Ig5772_scaffold_15981 2 1328 bp 66.27 3.61 70.03
Ig5772_scaffold_13661
Species: Thermosinus carboxydivorans (50%)
2 1544 bp 68.52 7.48 95.01
Displaying items 351-400 of 646 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.