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bjp_ig2158_scaffold_747

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2158_scaffold_747_1
unknown

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1..117
DNA (117bp) protein (39aa)

This feature has no annotations

bjp_ig2158_scaffold_747_2
unknown

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145..435
DNA (291bp) protein (97aa)

This feature has no annotations

bjp_ig2158_scaffold_747_3
unknown

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comp(445..744)
DNA (300bp) protein (100aa)

This feature has no annotations

bjp_ig2158_scaffold_747_4
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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857..2488
DNA (1632bp) protein (544aa)
PAS protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47GB9_DECAR rbh
PAS
PAS protein {ECO:0000313|EMBL:AAZ46112.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain R
bjp_ig2158_scaffold_747_5
Raoultella ornithinolytica, Raoultella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2585..2842)
DNA (258bp) protein (86aa)
Transcriptional regulator, XRE family n=1 Tax=Dickeya zeae (strain Ech1591) RepID=C6CML9_DICZE
XRE family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:KIZ46154.1}; TaxID=54291 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Raoultella.;" source="Raoultella ornit
bjp_ig2158_scaffold_747_6

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3022..5958
DNA (2937bp) protein (979aa)
Two-component sensor kinase n=1 Tax=planctomycete KSU-1 RepID=I3IR32_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:KKM53085.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
multi-sensor signal transduction histidine kinase
bjp_ig2158_scaffold_747_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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5945..8881
DNA (2937bp) protein (979aa)
PAS domain S-box (Fragment) n=1 Tax=Rhizobium sp. CF122 RepID=J3BG20_9RHIZ
multi-sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Signal transduction histidine kinase
bjp_ig2158_scaffold_747_8
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8878..9495
DNA (618bp) protein (206aa)
Two component LuxR family transcriptional regulator n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZGY3_9GAMM
Two component LuxR family transcriptional regulator {ECO:0000313|EMBL:EIT70967.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarbonip
histidine kinase
bjp_ig2158_scaffold_747_9
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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9623..10840
DNA (1218bp) protein (406aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4ZM18_THASP
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein Tax=GWA2_Rhodocyclales_65_20_curated
methyl-accepting chemotaxis sensory transducer
bjp_ig2158_scaffold_747_10
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10899..11264
DNA (366bp) protein (122aa)
Two-component system sensor histidine kinase/response regulator, putative n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DP32_PSEMN
Chemotaxis protein CheY {ECO:0000313|EMBL:EZH81063.1}; TaxID=1453503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseu
two component system sensor histidine kinase/response regulator
bjp_ig2158_scaffold_747_11
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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11275..11604
DNA (330bp) protein (110aa)
Anti-sigma-factor antagonist n=1 Tax=Thauera phenylacetica B4P RepID=N6Z9U9_9RHOO
Anti-anti-sigma factor {ECO:0000313|EMBL:KFB75862.1}; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
anti-sigma-factor antagonist
bjp_ig2158_scaffold_747_12
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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11636..13834
DNA (2199bp) protein (733aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thau
CheA signal transduction histidine kinase n=1 Tax=Thauera aminoaromatica S2 RepID=N6YDX4_9RHOO rbh
CheA signal transduction histidine kinase rbh
bjp_ig2158_scaffold_747_13
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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13953..15596
DNA (1644bp) protein (548aa)
Methyl-accepting chemotaxis sensory transducer n=2 Tax=Thauera RepID=C4ZM22_THASP rbh
methyl-accepting chemotaxis sensory transducer rbh
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ACK54077.1}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thaue
bjp_ig2158_scaffold_747_14
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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15609..16202
DNA (594bp) protein (198aa)
CheW protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SHI0_GALCS
CheW protein
CheW protein {ECO:0000313|EMBL:ADL55977.1}; TaxID=395494 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Gallionella.;" source="Gallionella capsiferriformans (s
bjp_ig2158_scaffold_747_15
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16204..17034
DNA (831bp) protein (277aa)
CheR-type MCP methyltransferase (EC:2.1.1.80) rbh
Chemotaxis protein methyltransferase {ECO:0000256|PIRNR:PIRNR000410}; EC=2.1.1.80 {ECO:0000256|PIRNR:PIRNR000410};; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rh
Chemotaxis protein methyltransferase n=2 Tax=Thauera RepID=C4ZM24_THASP rbh
bjp_ig2158_scaffold_747_16
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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17031..17543
DNA (513bp) protein (171aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria;
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Thauera phenylacetica B4P RepID=N6YB71_9RHOO
CheD, stimulates methylation of MCP protein
bjp_ig2158_scaffold_747_17
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

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17540..18028
DNA (489bp) protein (163aa)
Hemerythrin-like, metal-binding protein n=1 Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FTQ2_METHJ
hemerythrin-like metal-binding protein; K07216 hemerythrin Tax=CG_Nomura_01
hemerythrin-like, metal-binding
bjp_ig2158_scaffold_747_18
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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18013..19065
DNA (1053bp) protein (351aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=1348657 species="Bacteria; Proteobacteria; Betap
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Thauera terpenica 58Eu RepID=T0AUP8_9RHOO rbh
chemotaxis protein CheY
bjp_ig2158_scaffold_747_19
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19318..21867
DNA (2550bp) protein (850aa)
hypothetical protein n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI00037EB117 rbh
putative ATPase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
putative Signal transduction histidine kinase
bjp_ig2158_scaffold_747_20
GWA2_Gallionellales_55_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22075..23796
DNA (1722bp) protein (574aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00036F5230 rbh
methyl-accepting chemotaxis sensory transducer Tax=GWA2_Gallionellales_55_18_curated
methyl-accepting chemotaxis sensory transducer
bjp_ig2158_scaffold_747_21
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23800..24723
DNA (924bp) protein (308aa)
hypothetical protein n=2 Tax=Proteobacteria RepID=UPI000369AF96
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) Tax=CG_Beta_01
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
Displaying 21 items

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