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bjp_ig2158_scaffold_1611

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2158_scaffold_1611_1
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(2..469)
DNA (468bp) protein (156aa)
2-dehydro-3-deoxyphosphooctonate aldolase id=2245869 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_1611_2
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(466..2139)
DNA (1674bp) protein (558aa)
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase id=4689775 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae rbh
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_1611_3
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(2118..2876)
DNA (759bp) protein (253aa)
3-deoxy-manno-octulosonate cytidylyltransferase id=4689776 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae rbh
kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_1611_4
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

3028..3225
DNA (198bp) protein (66aa)
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_1611_5
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

3319..5100
DNA (1782bp) protein (594aa)
Phosphoenolpyruvate carboxykinase id=3929829 bin=GWF2_Nitrospirae_44_13 species=unknown genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
phosphoenolpyruvate carboxykinase
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_1611_6
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(5408..6148)
DNA (741bp) protein (247aa)
TraT complement resistance family protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WTD7_GEOS8
TraT complement resistance family protein
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_1611_7
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(6553..6912)
DNA (360bp) protein (120aa)
IstB domain protein ATP-binding protein n=1 Tax=Denitrovibrio acetiphilus (strain DSM 12809 / N2460) RepID=D4H2I8_DENA2
IstB domain-containing protein ATP-binding protein
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_1611_8
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

7258..7839
DNA (582bp) protein (194aa)
Two component transcriptional regulator, winged helix family id=4044513 bin=GWC2_Nitrospirae-rel_56_14 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
winged-helix transcriptional response regulator
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_1611_9
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(7784..9802)
DNA (2019bp) protein (673aa)
NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding id=4106481 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae rbh
formate dehydrogenase subunit alpha
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_1611_10
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(9933..10535)
DNA (603bp) protein (201aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
4Fe-4S ferredoxin iron-sulfur binding domain protein id=1862468 bin=GWB2_Nitrospirae_rel_47_37 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_1611_11
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(10544..12886)
DNA (2343bp) protein (781aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
NADH dehydrogenase (Quinone) id=1862471 bin=GWB2_Nitrospirae_rel_47_37 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum) rbh
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_1611_12
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(12890..13375)
DNA (486bp) protein (162aa)
hydC; electron bifurcating hydrogenase subunit HydC (EC:1.12.1.3)
NADH dehydrogenase (Ubiquinone) 24 kDa subunit id=4106478 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_1611_13
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(13421..15406)
DNA (1986bp) protein (662aa)
Carbon-monoxide dehydrogenase, catalytic subunit id=4106477 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae rbh
acetyl-CoA decarbonylase/synthase delta subunit
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_1611_14
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(15493..17694)
DNA (2202bp) protein (734aa)
bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta (EC:2.3.1.169)
CO dehydrogenase/acetyl-CoA synthase complex, beta subunit id=4127625 bin=GWF2_Nitrospirae_44_13 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_1611_15
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(17799..19139)
DNA (1341bp) protein (447aa)
acetyl-CoA decarbonylase/synthase complex gamma subunit (EC:2.1.1.-)
Acetyl-CoA decarbonylase/synthase complex gamma subunit id=3075250 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae rbh
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_1611_16
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(19215..20156)
DNA (942bp) protein (314aa)
Corrinoid/iron-sulfur protein, small subunit id=3075252 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae rbh
acetyl-CoA decarbonylase/synthase complex delta subunit
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_1611_17
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(20231..21019)
DNA (789bp) protein (263aa)
5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase id=3075257 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae rbh
5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_1611_18
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(21395..22027)
DNA (633bp) protein (211aa)
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III id=4044004 bin=GWF2_Nitrospirae_44_13 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_1611_19
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(22082..22696)
DNA (615bp) protein (205aa)
Metal dependent hydrolase id=4044006 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
metal dependent hydrolase
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_1611_20
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(22707..23651)
DNA (945bp) protein (315aa)
N-acetylglucosamine-6-phosphate deacetylase id=2081360 bin=GWD2_Nitrospirae-related_57_8 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
N-acetylglucosamine-6-phosphate deacetylase
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_1611_21
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

23804..24598
DNA (795bp) protein (265aa)
TRNA/rRNA methyltransferase (SpoU) id=4044008 bin=GWF2_Nitrospirae_44_13 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
rRNA methylase
Tax=BJP_IG2158_Nitrospirales_45_240
bjp_ig2158_scaffold_1611_trna_1
unknown

Not on your lists

comp(24707..24780)
DNA (74bp)
transferRNA
bjp_ig2158_scaffold_1611_22
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(24901..25836)
DNA (936bp) protein (312aa)
Radical SAM protein, family id=2245883 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum) rbh
radical SAM protein
Tax=BJP_IG2158_Nitrospirales_45_240
Displaying 23 items

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