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bjp_ig2158_scaffold_3973

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2158_scaffold_3973_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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2..325
DNA (324bp) protein (108aa)
putative ABC transporter ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Putative ABC transporter ATP-binding/permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE60_GEMAT id=5223291 bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ABC transporter transmembrane region
bjp_ig2158_scaffold_3973_2
unknown

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comp(350..832)
DNA (483bp) protein (161aa)

This feature has no annotations

bjp_ig2158_scaffold_3973_3
unknown

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comp(829..1233)
DNA (405bp) protein (135aa)

This feature has no annotations

bjp_ig2158_scaffold_3973_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(1230..3443)
DNA (2214bp) protein (738aa)
Uncharacterized protein n=1 Tax=uncultured bacterium FPPU_33B15 RepID=S4W5I1_9BACT
secreted metalloprotease Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
M6 family metalloprotease domain-containing protein
bjp_ig2158_scaffold_3973_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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3729..4934
DNA (1206bp) protein (402aa)
glycine C-acetyltransferase (EC:2.3.1.29) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036CAF16 rbh
aminotransferase class I and II
bjp_ig2158_scaffold_3973_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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4943..6058
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036686F2
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
bjp_ig2158_scaffold_3973_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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6055..7023
DNA (969bp) protein (323aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
NAD-dependent epimerase/dehydratase id=4674741 bin=GWA2_Ignavibacteriae_55_25 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_55_25 organism_group=Ignavibacteria
NAD-dependent epimerase/dehydratase
bjp_ig2158_scaffold_3973_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(7164..7481)
DNA (318bp) protein (106aa)
Blue-copper protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4M3_GEMAT
blue-copper protein Tax=GWC2_Gemmatimonadetes_71_10_curated
blue-copper protein
bjp_ig2158_scaffold_3973_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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7782..8615
DNA (834bp) protein (278aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
bjp_ig2158_scaffold_3973_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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8693..9214
DNA (522bp) protein (174aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC64_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA polymerase sigma factor, sigma-70 family
bjp_ig2158_scaffold_3973_11
unknown

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9198..10211
DNA (1014bp) protein (338aa)

This feature has no annotations

bjp_ig2158_scaffold_3973_12
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10791..11048)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SEX6_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB49078.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium ni
bjp_ig2158_scaffold_3973_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(11183..12727)
DNA (1545bp) protein (515aa)
aldehyde dehydrogenase (EC:1.2.1.3) rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:BAH40049.1}; EC=1.2.1.3 {ECO:0000313|EMBL:BAH40049.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;"
Aldehyde dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC22_GEMAT rbh
Displaying 13 items

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