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bjp_ig2158_scaffold_398

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2158_scaffold_398_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

2..1171
DNA (1170bp) protein (390aa)
sigma-54 dependent DNA-binding response regulator Tax=GWC2_Gemmatimonadetes_71_10_curated
sigma-54 dependent DNA-binding response regulator id=14626189 bin=bin7_NC10_sister species=Geopsychrobacter electrodiphilus genus=Geopsychrobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
Fis family transcriptional regulator
bjp_ig2158_scaffold_398_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(1332..1814)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7Z9_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
bjp_ig2158_scaffold_398_3
unknown

Not on your lists

comp(1857..2414)
DNA (558bp) protein (186aa)

This feature has no annotations

bjp_ig2158_scaffold_398_4
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(2427..3446)
DNA (1020bp) protein (340aa)
cytochrome b/b6 domain-containing protein Tax=RBG_16_Chloroflexi_63_12_curated
cytochrome b/b6 domain-containing protein id=1247385 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
cytochrome b/b6 domain-containing protein
bjp_ig2158_scaffold_398_5
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3505..3855)
DNA (351bp) protein (117aa)
GlnB1 n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QJ07_DESAH
glnB1; protein GlnB1
GlnB1 {ECO:0000313|EMBL:ACN13797.1}; TaxID=177437 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium.;" source="Desulfobacterium autotrophi
bjp_ig2158_scaffold_398_6
GWC2_Deltaproteobacteria_42_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3852..7025)
DNA (3174bp) protein (1058aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Desulfovibrio sp. X2 RepID=S7V003_9DELT
heavy metal efflux pump CzcA Tax=GWC2_Deltaproteobacteria_42_11_curated
cusA; cation efflux system protein
bjp_ig2158_scaffold_398_7
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7015..8259)
DNA (1245bp) protein (415aa)
Secretion protein HlyD family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7Z7_GEMAT rbh
secretion protein HlyD family protein
Secretion protein HlyD family protein {ECO:0000313|EMBL:BAH38357.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas auranti
bjp_ig2158_scaffold_398_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8256..9515)
DNA (1260bp) protein (420aa)
Outer membrane efflux protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7Z8_GEMAT
outer membrane efflux protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
outer membrane efflux protein
bjp_ig2158_scaffold_398_9
unknown

Not on your lists

comp(9574..9750)
DNA (177bp) protein (59aa)

This feature has no annotations

bjp_ig2158_scaffold_398_10
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(10029..10739)
DNA (711bp) protein (237aa)
hypothetical protein; K06966 id=14629986 bin=bin8_Chloro species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein; K06966 Tax=CSP1_4_Chloroflexi
hypothetical protein
bjp_ig2158_scaffold_398_11
Marinobacter manganoxydans, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11195..11350
DNA (156bp) protein (52aa)
Putative uncharacterized protein {ECO:0000313|EMBL:EHJ02430.1}; TaxID=1094979 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinob
bjp_ig2158_scaffold_398_12

Not on your lists

11337..11633
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2FV92_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKM85602.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
bjp_ig2158_scaffold_398_13
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

11626..12534
DNA (909bp) protein (303aa)
Patatin-like phospholipase domain protein n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A8G3_PELCD
alpha-beta hydrolase family esterase Tax=CG_OP9-01
patatin-like phospholipase domain-containing protein
bjp_ig2158_scaffold_398_14
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12546..13022)
DNA (477bp) protein (159aa)
Putative exported protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AH66_AZOBR
CopG family transcriptional regulator
CopG family transcriptional regulator {ECO:0000313|EMBL:AIB12937.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azos
bjp_ig2158_scaffold_398_15
unknown

Not on your lists

comp(13119..13754)
DNA (636bp) protein (212aa)

This feature has no annotations

bjp_ig2158_scaffold_398_16
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(13947..14588)
DNA (642bp) protein (214aa)
Uncharacterized protein id=14632733 bin=bin9_gal15 species=Agrococcus pavilionensis genus=Agrococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
Uncharacterized protein Tax=CSP1_3_Armatimonadetes
bjp_ig2158_scaffold_398_17
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(14589..14780)
DNA (192bp) protein (64aa)
silP; protein SilP (EC:3.6.3.-); K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=GWC2_Nitrospirae_57_13_curated
actP; copper-transporting P-type ATPase (EC:3.6.3.4)
hypothetical protein n=1 Tax=Corynebacterium nuruki RepID=UPI0002485A94
bjp_ig2158_scaffold_398_18
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(14770..15144)
DNA (375bp) protein (125aa)
copper-translocating P-type ATPase Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
copper-translocating P-type ATPase id=14429982 bin=bin3_NC10 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
copper-translocating P-type ATPase
bjp_ig2158_scaffold_398_19
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(15148..17661)
DNA (2514bp) protein (838aa)
Copper-transporting P-type ATPase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6YU20_MELRP
copper-transporting P-type ATPase
Copper-transporting P-type ATPase {ECO:0000313|EMBL:AFN74032.1}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melio
bjp_ig2158_scaffold_398_20
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17800..18984)
DNA (1185bp) protein (395aa)
Geranylgeranyl reductase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YQ3_SOLUE
dehydrogenase Tax=CG_Delta_03
geranylgeranyl reductase
bjp_ig2158_scaffold_398_21
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19261..20022)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADY4_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40711.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
bjp_ig2158_scaffold_398_22
unknown

Not on your lists

20049..20243
DNA (195bp) protein (65aa)

This feature has no annotations

bjp_ig2158_scaffold_398_23
Lyngbya confervoides, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(20183..21616)
DNA (1434bp) protein (478aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI0003700BD7
Uncharacterized protein {ECO:0000313|EMBL:KIF42963.1}; TaxID=1574623 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya confervoides BDU141951.;"
amidohydrolase
bjp_ig2158_scaffold_398_24
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(21655..22320)
DNA (666bp) protein (222aa)
Putative Tat (Twin-arginine translocation) pathway signal sequence containing protein n=1 Tax=Algoriphagus machipongonensis RepID=A3I0W9_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
bjp_ig2158_scaffold_398_25
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22538..23191)
DNA (654bp) protein (218aa)
TetR family transcriptional regulator n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI00036EA856
TetR family transcriptional regulator {ECO:0000313|EMBL:EYS97746.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupri
TetR family transcriptional regulator
bjp_ig2158_scaffold_398_26

Not on your lists

comp(23303..23773)
DNA (471bp) protein (157aa)
putative acetyltransferase (EC:2.3.1.-) id=14425577 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
Uncharacterized protein {ECO:0000313|EMBL:KKK66407.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
GCN5-ike N-acetyltransferase
bjp_ig2158_scaffold_398_27
Agarivorans albus, Agarivorans, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24009..24338)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Agarivorans albus MKT 106 RepID=R9PHW4_AGAAL
Uncharacterized protein {ECO:0000313|EMBL:GAD00823.1}; TaxID=1331007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Agarivorans.;" source="Agarivorans albus
hypothetical protein
bjp_ig2158_scaffold_398_28
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24439..25260)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00037304C5
Helix-turn-helix domain protein {ECO:0000313|EMBL:AKF05816.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source=
XRE family transcriptional regulator
bjp_ig2158_scaffold_398_29
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

25451..26239
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000366B4DA
glyoxalase family protein, putative
Glyoxalase family protein, putative {ECO:0000313|EMBL:ABW33005.1}; TaxID=329726 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris marina (s
bjp_ig2158_scaffold_398_30
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

26768..27628
DNA (861bp) protein (287aa)
alpha/beta hydrolase fold protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
alpha/beta hydrolase id=14629231 bin=bin8_Chloro species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
alpha/beta hydrolase fold protein
Displaying items 1-30 of 45 in total

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