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bjp_ig2158_scaffold_578

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2158_scaffold_578_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..161)
DNA (159bp) protein (53aa)
fabD; malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39); K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] Tax=RBG_16_Gemmatimonadetes_66_8_curated
ACP S-malonyltransferase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C3E2_9RHIZ
bjp_ig2158_scaffold_578_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(158..1150)
DNA (993bp) protein (331aa)
fabH; 3-oxoacyl-ACP synthase III (EC:2.3.1.180); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
fabH; 3-oxoacyl-ACP synthase III (EC:2.3.1.180)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X1_GEMAT rbh
bjp_ig2158_scaffold_578_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1147..2160)
DNA (1014bp) protein (338aa)
plsX; fatty acid/phospholipid synthesis protein PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Phosphate acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X2_GEMAT rbh
Phosphate acyltransferase
bjp_ig2158_scaffold_578_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2348..2824)
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67PG6_SYMTH
hypothetical protein; K07040 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF177
bjp_ig2158_scaffold_578_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2873..3304)
DNA (432bp) protein (144aa)
ndk; nucleoside diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X5_GEMAT
bjp_ig2158_scaffold_578_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3351..4223)
DNA (873bp) protein (291aa)
sucD; succinyl-CoA synthetase alpha chain (EC:6.2.1.5); K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8X7_GEMAT rbh
succinyl-CoA synthetase, alpha subunit
bjp_ig2158_scaffold_578_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4220..5359)
DNA (1140bp) protein (380aa)
sucC; succinyl-CoA synthetase beta chain (EC:6.2.1.5); K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5] Tax=GWC2_Gemmatimonadetes_71_10_curated
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SUCC_GEMAT rbh
Succinyl-CoA ligase [ADP-forming] subunit beta
bjp_ig2158_scaffold_578_8
Burkholderia sp. BT03, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5455..7803)
DNA (2349bp) protein (783aa)
membrane protein n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI0003780D30
UPF0182 protein PMI06_000488 {ECO:0000256|HAMAP-Rule:MF_01600}; TaxID=1144309 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkhold
hypothetical protein
bjp_ig2158_scaffold_578_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7807..9201)
DNA (1395bp) protein (465aa)
manB; phosphomannomutase (EC:5.4.2.8); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Phosphomannomutase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y0_GEMAT rbh
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
bjp_ig2158_scaffold_578_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9218..10708)
DNA (1491bp) protein (497aa)
nuoN; NADH-quinone oxidoreductase chain N (EC:1.6.99.5); K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
NADH-quinone oxidoreductase subunit N n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=NUON_GEMAT rbh
NAD(P)H-quinone oxidoreductase subunit 2
bjp_ig2158_scaffold_578_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10705..12258)
DNA (1554bp) protein (518aa)
NADH dehydrogenase subunit M (EC:1.6.5.3) Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH dehydrogenase subunit M (EC:1.6.5.3)
NADH dehydrogenase I subunit M id=1957574 bin=GWD2_Deltaproteobacteria_55_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
bjp_ig2158_scaffold_578_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12263..14302)
DNA (2040bp) protein (680aa)
nuoL; NADH-quinone oxidoreductase chain L (EC:1.6.99.5) Tax=GWC2_Gemmatimonadetes_71_10_curated
NADH-quinone oxidoreductase chain L n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y3_GEMAT rbh
proton-translocating NADH-quinone oxidoreductase, chain L
bjp_ig2158_scaffold_578_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14305..14601)
DNA (297bp) protein (99aa)
nuoK-1; NADH dehydrogenase I subunit K; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
NADH-quinone oxidoreductase subunit K 2 n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=NUOK2_GEOUR
NAD(P)H-quinone oxidoreductase subunit 4L
bjp_ig2158_scaffold_578_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14601..15161)
DNA (561bp) protein (187aa)
nuoJ; NADH-quinone oxidoreductase chain J (EC:1.6.99.5); K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NJZ3_DESAR
NADH-ubiquinone/plastoquinone oxidoreductase chain 6
bjp_ig2158_scaffold_578_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15158..15664)
DNA (507bp) protein (169aa)
nuoI; NADH-quinone oxidoreductase chain I (EC:1.6.99.5); K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
NADH-quinone oxidoreductase subunit I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y6_GEMAT
NAD(P)H-quinone oxidoreductase subunit I
bjp_ig2158_scaffold_578_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15664..16911)
DNA (1248bp) protein (416aa)
nuoH; NADH-quinone oxidoreductase chain H (EC:1.6.99.5); K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
nuoH; NADH-quinone oxidoreductase chain H (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit H n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y7_GEMAT rbh
bjp_ig2158_scaffold_578_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16908..18494)
DNA (1587bp) protein (529aa)
nuoG; putative NADH-quinone oxidoreductase chain G (EC:1.6.99.5); K00336 NADH-quinone oxidoreductase subunit G [EC:1.6.5.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative NADH-quinone oxidoreductase chain G n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y8_GEMAT rbh
NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein
bjp_ig2158_scaffold_578_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18499..19806)
DNA (1308bp) protein (436aa)
nuoF; NADH-quinone oxidoreductase chain F (EC:1.6.99.5); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
nuoF; NADH-quinone oxidoreductase chain F (EC:1.6.99.5)
NADH-quinone oxidoreductase chain F n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y9_GEMAT rbh
bjp_ig2158_scaffold_578_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19806..20315)
DNA (510bp) protein (170aa)
NADH-quinone oxidoreductase chain E n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z0_GEMAT
NADH-quinone oxidoreductase, E subunit
NADH-quinone oxidoreductase, E subunit {ECO:0000313|EMBL:AHG90828.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
bjp_ig2158_scaffold_578_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20312..21583)
DNA (1272bp) protein (424aa)
nuoD; NADH-quinone oxidoreductase chain D (EC:1.6.99.5); K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH-quinone oxidoreductase subunit D n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z1_GEMAT rbh
NAD(P)H-quinone oxidoreductase subunit H
bjp_ig2158_scaffold_578_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(21580..22206)
DNA (627bp) protein (209aa)
nuoC; NADH-quinone oxidoreductase chain C (EC:1.6.99.5); K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
nuoC; NADH-quinone oxidoreductase chain C (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit C n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z2_GEMAT
bjp_ig2158_scaffold_578_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(22203..22841)
DNA (639bp) protein (213aa)
nuoB; NADH-quinone oxidoreductase chain B (EC:1.6.99.5); K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH-quinone oxidoreductase subunit B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z3_GEMAT rbh
NAD(P)H-quinone oxidoreductase subunit K
bjp_ig2158_scaffold_578_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(22832..23197)
DNA (366bp) protein (122aa)
nuoA-1; NADH dehydrogenase I subunit A; K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
nuoA; NADH-quinone oxidoreductase chain A (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z4_GEMAT
bjp_ig2158_scaffold_578_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

23364..23942
DNA (579bp) protein (193aa)
deoxycytidine triphosphate deaminase (EC:3.5.4.13); K01494 dCTP deaminase [EC:3.5.4.13] Tax=RBG_16_Gemmatimonadetes_66_8_curated
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13)
Deoxycytidine triphosphate deaminase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4R9_9BURK
bjp_ig2158_scaffold_578_25
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24104..24865)
DNA (762bp) protein (254aa)
Succinate dehydrogenase and fumarate reductase iron-sulfur protein n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A8L1_THECD rbh
succinate dehydrogenase and fumarate reductase iron-sulfur protein
Succinate dehydrogenase and fumarate reductase iron-sulfur protein {ECO:0000313|EMBL:ACY96706.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonosp
bjp_ig2158_scaffold_578_26
CG_Omnitr_06, Omnitrophica, Bacteria

Not on your lists

comp(24862..26775)
DNA (1914bp) protein (638aa)
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] Tax=CG_Omnitr_06
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G9W4_CHLAD rbh
bjp_ig2158_scaffold_578_27
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(26785..27441)
DNA (657bp) protein (219aa)
sdhC; succinate dehydrogenase cytochrome b subunit (EC:1.3.99.1)
Succinate dehydrogenase cytochrome b subunit {ECO:0000313|EMBL:BAH38711.1}; EC=1.3.99.1 {ECO:0000313|EMBL:BAH38711.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonad
Succinate dehydrogenase cytochrome b subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A901_GEMAT
bjp_ig2158_scaffold_578_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(27455..28387)
DNA (933bp) protein (311aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; TaxID=861299 species="Bacteria; Ge
Malate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A902_GEMAT rbh
Malate dehydrogenase
bjp_ig2158_scaffold_578_29
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(28510..29010)
DNA (501bp) protein (167aa)
tRNA/rRNA methyltransferase SpoU; K03216 tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8E0U9_9FIRM
tRNA methyltransferase
Displaying 29 items

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