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bjp_ig2158_scaffold_795

Search features with annotation key words

Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2158_scaffold_795_1
unknown

Not on your lists

1..270
DNA (270bp) protein (90aa)

This feature has no annotations

bjp_ig2158_scaffold_795_2
unknown

Not on your lists

comp(862..1236)
DNA (375bp) protein (125aa)

This feature has no annotations

bjp_ig2158_scaffold_795_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1291..1965)
DNA (675bp) protein (225aa)
AraC family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A695_GEMAT
AraC family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
AraC family transcriptional regulator
bjp_ig2158_scaffold_795_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2061..2567)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A694_GEMAT
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AHG90163.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
bjp_ig2158_scaffold_795_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2567..3574)
DNA (1008bp) protein (336aa)
Putative transporter n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEH1_GEMAT
putative transporter; K02067 putative ABC transport system substrate-binding protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative transporter
bjp_ig2158_scaffold_795_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3571..4329)
DNA (759bp) protein (253aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A693_GEMAT rbh
ABC transporter related protein
ABC transporter related protein {ECO:0000313|EMBL:AHG90162.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
bjp_ig2158_scaffold_795_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4326..5051)
DNA (726bp) protein (242aa)
Putative transporter n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEH0_GEMAT rbh
putative transporter; K02066 putative ABC transport system permease protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative transporter
bjp_ig2158_scaffold_795_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5142..6080)
DNA (939bp) protein (313aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A692_GEMAT rbh
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA polymerase sigma factor, sigma-70 family
bjp_ig2158_scaffold_795_trna_1
unknown

Not on your lists

6206..6278
DNA (73bp)
transferRNA
bjp_ig2158_scaffold_795_trna_2
unknown

Not on your lists

6370..6442
DNA (73bp)
transferRNA
bjp_ig2158_scaffold_795_trna_3
unknown

Not on your lists

6483..6556
DNA (74bp)
transferRNA
bjp_ig2158_scaffold_795_trna_4
unknown

Not on your lists

6665..6738
DNA (74bp)
transferRNA
bjp_ig2158_scaffold_795_trna_5
unknown

Not on your lists

6767..6840
DNA (74bp)
transferRNA
bjp_ig2158_scaffold_795_trna_6
unknown

Not on your lists

6956..7030
DNA (75bp)
transferRNA
bjp_ig2158_scaffold_795_trna_7
unknown

Not on your lists

7140..7213
DNA (74bp)
transferRNA
bjp_ig2158_scaffold_795_9
unknown

Not on your lists

comp(7371..7991)
DNA (621bp) protein (207aa)

This feature has no annotations

bjp_ig2158_scaffold_795_10
RLO_PLX_64_10, Bacteria

Not on your lists

comp(8223..11333)
DNA (3111bp) protein (1037aa)
multidrug transporter AcrB n=1 Tax=Salisaeta longa RepID=UPI0003B5119A rbh
CzcA family heavy metal efflux protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
CzcA family heavy metal efflux protein
bjp_ig2158_scaffold_795_11
RLO_PLX_64_10, Bacteria

Not on your lists

comp(11342..12862)
DNA (1521bp) protein (507aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B40692 rbh
RND family efflux transporter MFP subunit Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
RND family efflux transporter MFP subunit
bjp_ig2158_scaffold_795_12
RLO_PLX_64_10, Bacteria

Not on your lists

comp(12871..14133)
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B3EBDF
outer membrane protein; K15725 cobalt-zinc-cadmium resistance protein CzcC Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
outer membrane efflux protein
bjp_ig2158_scaffold_795_13
unknown

Not on your lists

14300..14812
DNA (513bp) protein (171aa)

This feature has no annotations

bjp_ig2158_scaffold_795_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14919..15770)
DNA (852bp) protein (284aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
bjp_ig2158_scaffold_795_15
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

15951..17246
DNA (1296bp) protein (432aa)
Kef-type K+ transport system, membrane component n=2 Tax=Singulisphaera acidiphila RepID=L0D6D2_SINAD rbh
Kef-type K+ transport system membrane protein
Kef-type K+ transport system, membrane component {ECO:0000313|EMBL:AGA24822.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" s
bjp_ig2158_scaffold_795_16
unknown

Not on your lists

comp(17259..17447)
DNA (189bp) protein (63aa)

This feature has no annotations

bjp_ig2158_scaffold_795_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17447..17671)
DNA (225bp) protein (75aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
bjp_ig2158_scaffold_795_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17734..18855)
DNA (1122bp) protein (374aa)
peptidase M50 n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AF0B
putative membrane-associated Zn-dependent protease Tax=RBG_16_Gemmatimonadetes_66_8_curated
peptidase M50
bjp_ig2158_scaffold_795_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

19048..20295
DNA (1248bp) protein (416aa)
Transcription termination factor Rho n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XU49_9BACT id=5225141 bin=16ft_combo_ws3_JS1 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
rho; transcription termination factor; K03628 transcription termination factor Rho Tax=RBG_16_Gemmatimonadetes_66_8_curated
transcription termination factor Rho
bjp_ig2158_scaffold_795_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

20300..20755
DNA (456bp) protein (152aa)
Holliday junction resolvase YqgF; K07447 putative holliday junction resolvase [EC:3.1.-.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative Holliday junction resolvase (EC:3.1.-.-)
Putative Holliday junction resolvase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A648_GEMAT
bjp_ig2158_scaffold_795_21
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

20752..21747
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A647_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37707.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
bjp_ig2158_scaffold_795_22
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21752..22447
DNA (696bp) protein (232aa)
3-oxoacid CoA-transferase, A subunit n=1 Tax=Alicyclobacillus acidocaldarius (strain Tc-4-1) RepID=F8IFC1_ALIAT rbh
scoA; 3-oxoacid CoA-transferase subunit A
3-oxoacid CoA-transferase, A subunit {ECO:0000313|EMBL:AEJ44086.1}; TaxID=1048834 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus
bjp_ig2158_scaffold_795_23
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22444..23097
DNA (654bp) protein (218aa)
Succinyl-CoA:3-ketoacid-CoA transferase n=1 Tax=Alicyclobacillus acidoterrestris ATCC 49025 RepID=T0BMY6_9BACL
Succinyl-CoA:3-ketoacid-CoA transferase {ECO:0000313|EMBL:EPZ45398.1}; TaxID=1356854 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacill
3-oxoacid CoA-transferase subunit B
Displaying items 1-30 of 31 in total

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