ggKbase home page

bjp_ig2158_scaffold_963

Search features with annotation key words

Displaying items 1-30 of 33 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2158_scaffold_963_1
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..1242)
DNA (1242bp) protein (414aa)
Glycolate oxidase iron-sulfur subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y0_GEMAT rbh
glcF; glycolate oxidase iron-sulfur subunit
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas auran
bjp_ig2158_scaffold_963_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1226..2461)
DNA (1236bp) protein (412aa)
FAD linked oxidase domain-containing protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QFK8_9CYAN
glcE; glycolate oxidase subunit Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
glcE; FAD linked oxidase domain-containing protein
bjp_ig2158_scaffold_963_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2434..3864)
DNA (1431bp) protein (477aa)
glcD; glycolate oxidase subunit GlcD; K00104 glycolate oxidase [EC:1.1.3.15] Tax=GWC2_Gemmatimonadetes_71_10_curated
Glycolate oxidase subunit GlcD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y2_GEMAT rbh
glcD; glycolate oxidase subunit GlcD
bjp_ig2158_scaffold_963_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3968..4852)
DNA (885bp) protein (295aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y4_GEMAT rbh
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA polymerase sigma factor
bjp_ig2158_scaffold_963_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5609..6661)
DNA (1053bp) protein (351aa)
3-dehydroquinate synthase; K01735 3-dehydroquinate synthase [EC:4.2.3.4] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
3-dehydroquinate synthase
3-dehydroquinate synthase id=2464938 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
bjp_ig2158_scaffold_963_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6723..7268)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y6_GEMAT
ATP/cobalamin adenosyltransferase
ATP/cobalamin adenosyltransferase {ECO:0000313|EMBL:AHG90070.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
bjp_ig2158_scaffold_963_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7366..7584)
DNA (219bp) protein (73aa)
Transposase id=4194127 bin=GWC2_Methylomirabilis_70_24 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
transposase mutator type Tax=GWA2_Rokubacteria_70_23_curated
transposase mutator type
bjp_ig2158_scaffold_963_8
unknown

Not on your lists

7734..8045
DNA (312bp) protein (104aa)

This feature has no annotations

bjp_ig2158_scaffold_963_9
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8173..8310)
DNA (138bp) protein (46aa)
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
bjp_ig2158_scaffold_963_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

8385..8996
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S6Y6_PEDSD id=5223268 bin=16ft_combo_ws3_JS1 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
photosynthetic reaction centre cytochrome c subunit
Photosynthetic reaction centre cytochrome c subunit {ECO:0000313|EMBL:AHG88272.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
bjp_ig2158_scaffold_963_11
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

9221..10102
DNA (882bp) protein (294aa)
AraC family transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTD8_9GAMM
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:AIE87682.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbr
bjp_ig2158_scaffold_963_12
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10066..11544)
DNA (1479bp) protein (493aa)
Peptidase S41 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EJ85_9RHIZ
Peptidase S41 {ECO:0000313|EMBL:EYR82891.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
peptidase S41
bjp_ig2158_scaffold_963_13
Shewanella sediminis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11582..12640)
DNA (1059bp) protein (353aa)
Beta-lactamase domain protein n=1 Tax=Shewanella sediminis (strain HAW-EB3) RepID=A8FX57_SHESH
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:ABV37430.1}; Flags: Precursor;; TaxID=425104 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" sour
bjp_ig2158_scaffold_963_14
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

12787..13953
DNA (1167bp) protein (389aa)
Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YPX8_BRAFL
hypothetical protein
Tax=RBG_16_Acidobacteria_64_8_curated
bjp_ig2158_scaffold_963_15
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

Not on your lists

13992..14447
DNA (456bp) protein (152aa)
NHL repeat containing protein Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
bjp_ig2158_scaffold_963_16
unknown

Not on your lists

14754..15035
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B7A592
bjp_ig2158_scaffold_963_17
unknown

Not on your lists

15090..15731
DNA (642bp) protein (214aa)

This feature has no annotations

bjp_ig2158_scaffold_963_18
unknown

Not on your lists

15692..15961
DNA (270bp) protein (90aa)

This feature has no annotations

bjp_ig2158_scaffold_963_19
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15979..16533
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3V6_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH38781.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
bjp_ig2158_scaffold_963_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16569..17540)
DNA (972bp) protein (324aa)
Hydrolase n=1 Tax=Streptomyces collinus Tu 365 RepID=S5VH46_STRCU
alpha/beta hydrolase fold-containing protein
Alpha/beta hydrolase fold-containing protein {ECO:0000313|EMBL:AHG88186.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
bjp_ig2158_scaffold_963_21
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17705..18355
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWF3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAM97547.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
hypothetical protein
bjp_ig2158_scaffold_963_22
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18463..18879
DNA (417bp) protein (139aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4W9X0_9GAMM
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EIL96261.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rh
RNA polymerase sigma factor, sigma-70 family
bjp_ig2158_scaffold_963_23
unknown

Not on your lists

18876..19397
DNA (522bp) protein (174aa)

This feature has no annotations

bjp_ig2158_scaffold_963_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19620..20630
DNA (1011bp) protein (337aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91847.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
bjp_ig2158_scaffold_963_25
unknown

Not on your lists

20970..21200
DNA (231bp) protein (77aa)

This feature has no annotations

bjp_ig2158_scaffold_963_26
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21394..22179
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8E4_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH38504.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
bjp_ig2158_scaffold_963_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(22334..22735)
DNA (402bp) protein (134aa)
PilT protein-like n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NMY7_9DELT
PilT domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
pilT2; protein PilT
bjp_ig2158_scaffold_963_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(22732..22965)
DNA (234bp) protein (78aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative uncharacterized protein id=4205429 bin=GWC2_CP_Nitrospirae-rel_42_7 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
bjp_ig2158_scaffold_963_29
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(23514..25073)
DNA (1560bp) protein (520aa)
D-alanyl-D-alanine carboxypeptidase; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] Tax=RIFCSPLOWO2_02_FULL_Gemmati
D-Ala-D-Ala carboxypeptidase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1II05_KORVE
D-alanyl-D-alanine carboxypeptidase
bjp_ig2158_scaffold_963_30
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(25039..25959)
DNA (921bp) protein (307aa)
Putative ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y8_GEMAT rbh
putative ABC transporter permease protein
Putative ABC transporter permease protein {ECO:0000313|EMBL:BAH37648.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aur
Displaying items 1-30 of 33 in total

View Taxonomy