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bjp_ig2158_scaffold_3513

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2158_scaffold_3513_1
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..359
DNA (357bp) protein (119aa)
Putative transposase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YR41_9SPHN
Putative transposase {ECO:0000313|EMBL:GAD51187.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobiu
transposase IS3/IS911
bjp_ig2158_scaffold_3513_2
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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356..1201
DNA (846bp) protein (282aa)
Integrase catalytic subunit n=2 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LCF1_BURGS rbh
integrase catalytic subunit
Integrase catalytic subunit {ECO:0000313|EMBL:AEA60203.1}; TaxID=999541 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia g
bjp_ig2158_scaffold_3513_3
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1635..2693
DNA (1059bp) protein (353aa)
ferrochelatase; K01772 ferrochelatase [EC:4.99.1.1] Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
hemH; Ferrochelatase (EC:4.99.1.1)
Ferrochelatase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W4C2_9SPHN rbh
bjp_ig2158_scaffold_3513_4
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2754..3308)
DNA (555bp) protein (185aa)
Beta-Ig-H3/fasciclin n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GUF8_SPHAL rbh
beta-Ig-H3/fasciclin Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
beta-Ig-H3/fasciclin
bjp_ig2158_scaffold_3513_5
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3527..3949
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VV64_9SPHN
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
hypothetical protein
bjp_ig2158_scaffold_3513_6
unknown

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comp(3850..4290)
DNA (441bp) protein (147aa)

This feature has no annotations

bjp_ig2158_scaffold_3513_7
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4303..5043)
DNA (741bp) protein (247aa)
deoxyribodipyrimidine photolyase; K01669 deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
Deoxyribodipyrimidine photo-lyase type I n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GUF7_SPHAL rbh
deoxyribodipyrimidine photolyase
bjp_ig2158_scaffold_3513_8
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5024..5620)
DNA (597bp) protein (199aa)
deoxyribodipyrimidine photolyase; K01669 deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
Deoxyribodipyrimidine photo-lyase type I n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GUF7_SPHAL
deoxyribodipyrimidine photolyase
bjp_ig2158_scaffold_3513_9
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5881..7443)
DNA (1563bp) protein (521aa)
crtQ; zeta-carotene desaturase (EC:1.14.99.-); K10027 phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31] Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
crtQ; zeta-carotene desaturase (EC:1.14.99.-)
Phytoene dehydrogenase n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MU45_9SPHN rbh
bjp_ig2158_scaffold_3513_10
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7440..8384)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UU04_9SPHN rbh
hypothetical protein; K06955 Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
hypothetical protein
bjp_ig2158_scaffold_3513_11
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8524..9174
DNA (651bp) protein (217aa)
LuxR family transcriptional regulator; K00936 [EC:2.7.3.-] Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
LuxR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPB3_9SPHN
LuxR family transcriptional regulator
bjp_ig2158_scaffold_3513_12
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9274..9999
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00035F5304
short-chain dehydrogenase/reductase SDR Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
short-chain dehydrogenase/reductase SDR
bjp_ig2158_scaffold_3513_13
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10361..11626)
DNA (1266bp) protein (422aa)
Phage integrase family protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPG2_9SPHN rbh
Phage integrase family protein {ECO:0000313|EMBL:ENY80204.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingo
phage integrase family protein
bjp_ig2158_scaffold_3513_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12075..12329)
DNA (255bp) protein (85aa)
Transcriptional regulator n=1 Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U1AMW2_9NEIS
transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
hypothetical protein
bjp_ig2158_scaffold_3513_15
unknown

Not on your lists

12414..12677
DNA (264bp) protein (88aa)

This feature has no annotations

bjp_ig2158_scaffold_3513_16
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12790..13251)
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EZG3_SPHCR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG48439.1}; TaxID=690566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlo
Displaying 16 items

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