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bjp_ig2158_scaffold_681

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2158_scaffold_681_1
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..493
DNA (492bp) protein (164aa)
Putative membrane protein n=1 Tax=Bordetella avium (strain 197N) RepID=Q2KYB8_BORA1
Uncharacterized protein Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
membrane protein
bjp_ig2158_scaffold_681_2
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(495..977)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GSE9_SPHAL
Uncharacterized protein {ECO:0000313|EMBL:KGB51698.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
bjp_ig2158_scaffold_681_3
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1117..1680
DNA (564bp) protein (188aa)
Transcriptional regulator, XRE family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GSE8_SPHAL rbh
Transcriptional regulator, XRE family {ECO:0000313|EMBL:KGB51697.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="
XRE family transcriptional regulator
bjp_ig2158_scaffold_681_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1680..2861
DNA (1182bp) protein (394aa)
Group 1 glycosyl transferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPI5_9SPHN rbh
Group 1 glycosyl transferase {ECO:0000313|EMBL:ENY80234.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopy
group 1 glycosyl transferase
bjp_ig2158_scaffold_681_5
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2951..3586)
DNA (636bp) protein (212aa)
Rhomboid-like protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GUG8_SPHAL rbh
Rhomboid-like protein {ECO:0000313|EMBL:KGB58419.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp.
rhomboid-like protein
bjp_ig2158_scaffold_681_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3603..4079)
DNA (477bp) protein (159aa)
Transcription elongation factor GreA n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAY0_9SPHN
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1174684 species="Bacteri
greA; transcription elongation factor GreA
bjp_ig2158_scaffold_681_7
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4177..7497)
DNA (3321bp) protein (1107aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria;
carB; Carbamoyl-phosphate synthase large chain (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VZH2_9SPHN rbh
bjp_ig2158_scaffold_681_8
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7538..8812)
DNA (1275bp) protein (425aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
Carbamoyl-phosphate synthase small chain n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAB1_9SPHN rbh
carbamoyl phosphate synthase small subunit
bjp_ig2158_scaffold_681_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8946..9398
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UQL7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY80629.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
bjp_ig2158_scaffold_681_10
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9441..9875
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EXI6_SPHCR
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
hypothetical protein
bjp_ig2158_scaffold_681_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9875..11764
DNA (1890bp) protein (630aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=1174684 species="Bacteria; Proteobacte
DNA primase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAY6_9SPHN rbh
DNA primase
bjp_ig2158_scaffold_681_12
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11802..13811
DNA (2010bp) protein (670aa)
RNA polymerase sigma factor RpoD n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VZH8_9SPHN rbh
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
RNA polymerase sigma factor RpoD
bjp_ig2158_scaffold_681_13
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14451..14756
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAB6_9SPHN
PspC domain protein {ECO:0000313|EMBL:KGB53026.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. L
hypothetical protein
bjp_ig2158_scaffold_681_14
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15003..15674
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GUH8_SPHAL rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF52694.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis al
bjp_ig2158_scaffold_681_15
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15844..16686
DNA (843bp) protein (281aa)
ATPase associated with various cellular activities, AAA_5 n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GSM0_SPHAL rbh
ATPase
ATPase associated with various cellular activities, AAA_5 {ECO:0000313|EMBL:ABF53352.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphin
bjp_ig2158_scaffold_681_16
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16703..17881
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W5D4_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY82737.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
bjp_ig2158_scaffold_681_17
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18031..19236)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WH25_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY82741.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
bjp_ig2158_scaffold_681_18
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19233..19817)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CCB7B
Uncharacterized protein {ECO:0000313|EMBL:GAO39682.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas c
hypothetical protein
bjp_ig2158_scaffold_681_19
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20231..21457
DNA (1227bp) protein (409aa)
tyrS; Tyrosine-tRNA ligase (EC:6.1.1.1)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00009759}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:00002
Tyrosine--tRNA ligase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWX9_9SPHN rbh
bjp_ig2158_scaffold_681_20
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21532..21873
DNA (342bp) protein (114aa)
Type IV pilus assembly PilZ n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWF1_9SPHN
Type IV pilus assembly PilZ {ECO:0000313|EMBL:ENY82745.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyx
type IV pilus assembly PilZ
bjp_ig2158_scaffold_681_21
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22078..24144)
DNA (2067bp) protein (689aa)
DEAD/DEAH box helicase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WH30_9SPHN rbh
DEAD/DEAH box helicase {ECO:0000313|EMBL:ENY82746.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp
DEAD/DEAH box helicase
bjp_ig2158_scaffold_681_22
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24367..24627
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W5E2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KGB53041.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
bjp_ig2158_scaffold_681_23
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24624..26132
DNA (1509bp) protein (503aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; Flags: Precursor;; TaxID=317655 sp
Transcription-repair-coupling factor n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GSK6_SPHAL
transcription-repair coupling factor
Displaying 23 items

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