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bjp_ig2158_scaffold_1186

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2158_scaffold_1186_1
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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314..682
DNA (369bp) protein (123aa)
Conjugation TrbI-like protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQ88_SPHAL
Conjugation TrbI-like protein {ECO:0000313|EMBL:KGB53621.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingop
type IV secretion system protein VirB10
bjp_ig2158_scaffold_1186_2
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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679..900
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQ89_SPHAL
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
hypothetical protein
bjp_ig2158_scaffold_1186_3
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1002..1637)
DNA (636bp) protein (212aa)
Transcriptional regulator, TetR family n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BYH1_HYPNA
TetR family transcriptional regulator Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
TetR family transcriptional regulator
bjp_ig2158_scaffold_1186_4
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1710..2738
DNA (1029bp) protein (343aa)
Aminoglycoside phosphotransferase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQ10_PARL1
aminoglycoside phosphotransferase Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
aminoglycoside phosphotransferase
bjp_ig2158_scaffold_1186_5
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2749..3486
DNA (738bp) protein (246aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
Short chain dehydrogenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USI7_9SPHN rbh
short-chain dehydrogenase/reductase SDR
bjp_ig2158_scaffold_1186_6
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3513..4739
DNA (1227bp) protein (409aa)
acyl-CoA dehydrogenase; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3] Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
Acyl-CoA dehydrogenase-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5C6_NOVAD rbh
acyl-CoA dehydrogenase
bjp_ig2158_scaffold_1186_7
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4761..5801
DNA (1041bp) protein (347aa)
sorbitol dehydrogenase (EC:1.1.1.14) rbh
UPI0003D01120 related cluster n=1 Tax=unknown RepID=UPI0003D01120 rbh
alcohol dehydrogenase Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
bjp_ig2158_scaffold_1186_8
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5971..7251)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HUS3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB16842.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
major facilitator superfamily protein
bjp_ig2158_scaffold_1186_9
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7881..8858
DNA (978bp) protein (326aa)
Transcriptional regulator, LysR family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5D0_NOVAD
LysR family transcriptional regulator {ECO:0000313|EMBL:KHS45624.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source=
LysR family transcriptional regulator
bjp_ig2158_scaffold_1186_10
Burkholderia sp. A9, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9052..10629
DNA (1578bp) protein (526aa)
Tannase and feruloyl esterase n=1 Tax=Burkholderia cepacia GG4 RepID=J7J9Y0_BURCE rbh
Uncharacterized protein {ECO:0000313|EMBL:KHK60377.1}; TaxID=1365108 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp.
tannase and feruloyl esterase rbh
bjp_ig2158_scaffold_1186_11
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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10670..11002
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GRB7_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIT06220.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas t
bjp_ig2158_scaffold_1186_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11426..12016
DNA (591bp) protein (197aa)
Regulatory protein TetR n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VIL2_RHOPX
regulatory protein TetR
Regulatory protein TetR {ECO:0000313|EMBL:ADU44330.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
bjp_ig2158_scaffold_1186_13
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12268..15666)
DNA (3399bp) protein (1133aa)
Glycoside hydrolase family 2, sugar binding protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7K6_NOVAD rbh
Glycoside hydrolase {ECO:0000313|EMBL:KHS46780.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium s
glycoside hydrolase
bjp_ig2158_scaffold_1186_14
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15775..18063)
DNA (2289bp) protein (763aa)
beta-glucosidase (EC:3.2.1.21)
Beta-glucosidase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WEH8_9SPHN rbh
Beta-glucosidase {ECO:0000313|EMBL:EIZ78646.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp.
bjp_ig2158_scaffold_1186_15
unknown

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comp(18105..18188)
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 15 items

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