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bjp_ig2158_scaffold_1466

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2158_scaffold_1466_1
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..204)
DNA (204bp) protein (68aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GV01_SPHAL
two component transcriptional regulator
Two-component system OmpR family response regulator {ECO:0000313|EMBL:KGB56975.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyx
bjp_ig2158_scaffold_1466_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(323..637)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WC56_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81328.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
bjp_ig2158_scaffold_1466_trna_1
unknown

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comp(733..804)
DNA (72bp)
transferRNA
bjp_ig2158_scaffold_1466_3
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1017..1289)
DNA (273bp) protein (91aa)
Histone-like DNA-binding protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GV03_SPHAL
histone-like DNA-binding protein
Histone-like DNA-binding protein {ECO:0000313|EMBL:ABF52519.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphing
bjp_ig2158_scaffold_1466_4
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1460..3856)
DNA (2397bp) protein (799aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
Lon protease n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GV04_SPHAL rbh
ATP-dependent protease La
bjp_ig2158_scaffold_1466_5
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4068..4403)
DNA (336bp) protein (112aa)
Nucleoid-associated protein EBMC1_09764 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WCX7_9SPHN
Nucleoid-associated protein FG95_03802 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" sou
hypothetical protein
bjp_ig2158_scaffold_1466_6
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4400..6112)
DNA (1713bp) protein (571aa)
DNA polymerase III, subunits gamma and tau {ECO:0000313|EMBL:KGB51554.1}; EC=2.7.7.7 {ECO:0000313|EMBL:KGB51554.1};; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonada
DNA polymerase III, subunits gamma and tau n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GV06_SPHAL rbh
DNA polymerase III subunits gamma and tau rbh
bjp_ig2158_scaffold_1466_7
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6480..6815)
DNA (336bp) protein (112aa)
Ferredoxin n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GV07_SPHAL
Ferredoxin {ECO:0000313|EMBL:KGB51553.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
ferredoxin
bjp_ig2158_scaffold_1466_8
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6815..7900)
DNA (1086bp) protein (362aa)
Aminotransferase, class V {ECO:0000313|EMBL:ABF52514.1}; EC=2.8.1.7 {ECO:0000313|EMBL:ABF52514.1};; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
Aminotransferase, class V n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GV08_SPHAL rbh
class V aminotransferase
bjp_ig2158_scaffold_1466_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8156..8812
DNA (657bp) protein (219aa)
Alpha/beta hydrolase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W1I9_9SPHN rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:ENY81337.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp.
hydrolase
bjp_ig2158_scaffold_1466_10
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8961..9125)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WC65_9SPHN
Putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ENY81338.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
bjp_ig2158_scaffold_1466_11
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9248..9700
DNA (453bp) protein (151aa)
RpiB/LacA/LacB family sugar-phosphate isomerase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USP1_9SPHN
RpiB/LacA/LacB family sugar-phosphate isomerase
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
bjp_ig2158_scaffold_1466_12
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9697..11004
DNA (1308bp) protein (436aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
Serine hydroxymethyltransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9US99_9SPHN rbh
glyA; serine hydroxymethyltransferase
bjp_ig2158_scaffold_1466_13
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11007..11471
DNA (465bp) protein (155aa)
Transcriptional repressor NrdR n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W1J2_9SPHN
nrdR; transcriptional regulator NrdR; K07738 transcriptional repressor NrdR Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
nrdR; transcriptional regulator NrdR
bjp_ig2158_scaffold_1466_14
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11541..12641
DNA (1101bp) protein (367aa)
tRNA/rRNA methyltransferase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SD34_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:AHE57490.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
tRNA/rRNA methyltransferase
bjp_ig2158_scaffold_1466_15
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12773..13105)
DNA (333bp) protein (111aa)
Chorismate mutase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USP4_9SPHN
Chorismate mutase {ECO:0000313|EMBL:ENY81344.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1
chorismate mutase
bjp_ig2158_scaffold_1466_16
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13292..13903
DNA (612bp) protein (204aa)
30S ribosomal protein S4 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USA4_9SPHN rbh
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopy
rpsD; 30S ribosomal protein S4
bjp_ig2158_scaffold_1466_17
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13957..15828)
DNA (1872bp) protein (624aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D175_SPHYA rbh
Prolyl oligopeptidase family protein {ECO:0000313|EMBL:KGB56955.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="S
peptidase S9 prolyl oligopeptidase
Displaying 18 items

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