ggKbase home page

bjp_ig2158_scaffold_5700

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2158_scaffold_5700_1
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(226..1035)
DNA (810bp) protein (270aa)
Cytochrome c1 n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GTG5_SPHAL rbh
cytochrome c1
Cytochrome c1 {ECO:0000313|EMBL:ABF53057.1}; Flags: Precursor;; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphing
bjp_ig2158_scaffold_5700_2
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1067..2347)
DNA (1281bp) protein (427aa)
Cytochrome b n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GTG4_SPHAL rbh
cytochrome b/b6-like protein rbh
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis
bjp_ig2158_scaffold_5700_3
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2361..2918)
DNA (558bp) protein (186aa)
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria;
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GTG3_SPHAL rbh
ubiquinol-cytochrome c reductase, iron-sulfur subunit
bjp_ig2158_scaffold_5700_4
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3109..3567
DNA (459bp) protein (153aa)
tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL {ECO:0000256|HAMAP-R
tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPS0_9SPHN
tRNA/rRNA methyltransferase SpoU
bjp_ig2158_scaffold_5700_5
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3564..4424
DNA (861bp) protein (287aa)
Coproporphyrinogen oxidase {ECO:0000256|SAAS:SAAS00122066}; EC=1.3.3.3 {ECO:0000256|SAAS:SAAS00122066};; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingo
hemF; Coproporphyrinogen-III oxidase, aerobic (EC:1.3.3.3)
Coproporphyrinogen III oxidase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W9G4_9SPHN rbh
bjp_ig2158_scaffold_5700_6
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4427..5242)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GTF9_SPHAL
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
hypothetical protein
bjp_ig2158_scaffold_5700_7
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5387..5557
DNA (171bp) protein (57aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000
lipB; Octanoyltransferase (EC:2.3.1.181)
Octanoyltransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPG5_9SPHN
Displaying 7 items

View Taxonomy