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BJP_Ig2158_Hor_250_2014_Bacteroidetes_37_5_partial

BJP_IG2158_Bacteroidetes_38_5
In projects: 09V250M02_2014  |  horonobe_genomes

Consensus taxonomy: Bacteroidetes  →  Bacteria

Metagenomic Context

Parent: BJP_IG2158_UNK

Properties

Avg. coverage: 5.31 Longest contig: 16.00 Kbp Bin length: 2.08 Mbp GC content: 37.69 %
Contigs count: 541 Features count: 2301 rRNAs count: 0 tRNAs count: 23

Genome completeness

partial RP 36 / 55 MC: 4 BSCG 34 / 51 MC: 2 ASCG 5 / 38

Description

Approx

Displaying items 51-100 of 541 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
bjp_ig2158_scaffold_7335
Species: RLO_Flavobacteria_35_11 (71.43%)
7 4476 bp 35.86 7.07 86.19
bjp_ig2158_scaffold_7352
Class: Bacteroidia (85.71%)
7 4468 bp 36.73 4.87 91.99
bjp_ig2158_scaffold_10073
Class: Bacteroidia (66.67%)
6 3395 bp 36.67 4.68 85.98
bjp_ig2158_scaffold_6944
Class: Bacteroidia (100%)
6 4697 bp 37.64 4.09 83.80
bjp_ig2158_scaffold_13585
Phylum: Bacteroidetes (100%)
6 2610 bp 31.34 4.20 87.59
bjp_ig2158_scaffold_2546
Phylum: Bacteroidetes (83.33%)
6 10769 bp 35.64 5.18 90.90
bjp_ig2158_scaffold_6442
Class: Bacteroidia (83.33%)
6 5004 bp 36.11 4.62 90.11
bjp_ig2158_scaffold_13342
Species: GWA2_Bacteroidetes_31_9b_curated (66.67%)
6 2654 bp 35.53 5.03 93.93
bjp_ig2158_scaffold_10871
Phylum: Bacteroidetes (83.33%)
6 3177 bp 38.09 4.96 91.12
bjp_ig2158_scaffold_9826
Class: Bacteroidia (50%)
6 3468 bp 37.25 4.07 95.76
bjp_ig2158_scaffold_7666
Class: Bacteroidia (50%)
6 4306 bp 38.67 4.32 84.23
bjp_ig2158_scaffold_14397
Class: Bacteroidia (83.33%)
6 2484 bp 41.99 6.64 85.67
bjp_ig2158_scaffold_3800
Species: BJP_IG2103_Bacteroidetes_37_22 (83.33%)
6 7874 bp 38.58 5.03 97.46
bjp_ig2158_scaffold_8155
Phylum: Bacteroidetes (50%)
6 4087 bp 37.53 4.66 89.55
bjp_ig2158_scaffold_4199
Phylum: Bacteroidetes (100%)
6 7227 bp 38.55 6.99 93.03
bjp_ig2158_scaffold_7945
Class: Bacteroidia (50%)
6 4178 bp 38.58 5.71 80.76
bjp_ig2158_scaffold_6267
Species: BJP_08E140C01_Flavobacteriales_35_8 (83.33%)
6 5133 bp 35.42 7.01 89.66
bjp_ig2158_scaffold_8201
Domain: Archaea (50%)
6 4066 bp 35.10 9.59 85.66
bjp_ig2158_scaffold_5522
Phylum: Bacteroidetes (50%)
6 5715 bp 37.36 7.56 80.73
bjp_ig2158_scaffold_11981
Class: Bacteroidia (50%)
6 2924 bp 36.08 5.03 69.05
bjp_ig2158_scaffold_5290
Species: GWD2_Bacteroidetes_33_33_curated (50%)
6 5948 bp 36.48 4.82 84.03
bjp_ig2158_scaffold_4018
Class: Bacteroidia (83.33%)
6 7545 bp 35.65 5.69 94.43
bjp_ig2158_scaffold_16386
Class: Bacteroidia (83.33%)
6 2219 bp 41.69 3.99 94.50
bjp_ig2158_scaffold_4789
Class: Bacteroidia (66.67%)
6 6486 bp 38.02 4.93 79.83
bjp_ig2158_scaffold_5815
Species: BJP_IG2102_Cloacimonetes_48_20 (50%)
6 5458 bp 35.21 4.70 97.01
bjp_ig2158_scaffold_5050
Class: Bacteroidia (83.33%)
6 6200 bp 39.56 4.60 89.81
bjp_ig2158_scaffold_5570
Species: GWD2_Bacteroidetes_33_33_curated (66.67%)
6 5666 bp 41.69 5.48 97.42
bjp_ig2158_scaffold_12008
Class: Bacteroidia (83.33%)
6 2918 bp 39.58 4.06 92.15
bjp_ig2158_scaffold_4303
Class: Bacteroidia (83.33%)
6 7066 bp 34.35 4.10 89.50
bjp_ig2158_scaffold_3655
Domain: Bacteria (50%)
6 8134 bp 42.24 4.68 85.92
bjp_ig2158_scaffold_6339
Class: Bacteroidia (50%)
6 5079 bp 37.65 4.58 84.29
bjp_ig2158_scaffold_5593
Phylum: Bacteroidetes (66.67%)
6 5643 bp 36.90 4.33 89.42
bjp_ig2158_scaffold_11269
Class: Bacteroidia (50%)
6 3081 bp 35.61 4.67 80.72
bjp_ig2158_scaffold_4073
Phylum: Bacteroidetes (50%)
6 7432 bp 36.98 5.23 78.88
bjp_ig2158_scaffold_7055
Class: Bacteroidia (66.67%)
6 4634 bp 36.81 4.40 97.24
bjp_ig2158_scaffold_6881
Class: Bacteroidia (66.67%)
6 4734 bp 38.02 4.15 78.58
bjp_ig2158_scaffold_5618
Species: GWE2_Bacteroidetes_32_14_curated (50%)
6 5612 bp 37.99 5.00 94.99
bjp_ig2158_scaffold_4856
Class: Bacteroidia (83.33%)
6 6405 bp 40.94 4.38 85.95
bjp_ig2158_scaffold_5128
Species: BJP_IG2102_Bacteroidetes_40_9 (50%)
6 6122 bp 39.45 4.75 81.69
bjp_ig2158_scaffold_5388
Phylum: Bacteroidetes (50%)
6 5846 bp 36.38 4.26 81.75
bjp_ig2158_scaffold_8334
Class: Bacteroidia (66.67%)
6 4012 bp 36.37 3.78 93.54
bjp_ig2158_scaffold_4892
Class: Bacteroidia (83.33%)
6 6368 bp 38.30 4.90 91.91
bjp_ig2158_scaffold_7108
Class: Bacteroidia (50%)
6 4605 bp 37.89 5.60 86.45
bjp_ig2158_scaffold_7366
Phylum: Bacteroidetes (50%)
6 4457 bp 35.58 4.85 78.75
bjp_ig2158_scaffold_5683
Class: Bacteroidia (100%)
5 5566 bp 39.78 5.15 90.23
bjp_ig2158_scaffold_14368
Phylum: Bacteroidetes (60%)
5 2487 bp 37.15 6.03 79.73
bjp_ig2158_scaffold_8125
Class: Bacteroidia (80%)
5 4097 bp 38.78 4.94 95.92
bjp_ig2158_scaffold_16021
Class: Bacteroidia (60%)
5 2264 bp 35.42 4.11 78.45
bjp_ig2158_scaffold_15000
Class: Bacteroidia (60%)
5 2395 bp 35.82 4.57 87.56
bjp_ig2158_scaffold_13355
Class: Bacteroidia (80%)
5 2652 bp 36.99 5.94 77.94
Displaying items 51-100 of 541 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.