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Ig8144_scaffold_1172

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig8144_scaffold_1172_1
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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1..237
DNA (237bp) protein (79aa)
Uncharacterized protein Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FQ62_METHJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD41568.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig8144_scaffold_1172_2
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(559..1122)
DNA (564bp) protein (188aa)
CheW protein Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FLH7_METHJ
chemotaxis protein CheW
CheW protein {ECO:0000313|EMBL:ABD39784.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig8144_scaffold_1172_3
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1142..1372)
DNA (231bp) protein (77aa)
Methyl-accepting chemotaxis sensory transducer Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FP73_METHJ
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ABD41157.1}; Flags: Precursor;; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig8144_scaffold_1172_4
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1465..2148
DNA (684bp) protein (228aa)
Putative PAS/PAC sensor protein Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FP74_METHJ
PAS/PAC sensor protein
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:ABD41156.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig8144_scaffold_1172_5
unknown

Not on your lists

comp(2178..3299)
DNA (1122bp) protein (374aa)

This feature has no annotations

Ig8144_scaffold_1172_6
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3339..4301
DNA (963bp) protein (321aa)
Substrate-binding region of ABC-type glycine betaine transport system Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GHU4_METPE
glycine betaine ABC transporter substrate-binding protein
Substrate-binding region of ABC-type glycine betaine transport system {ECO:0000313|EMBL:ACL16684.1}; Flags: Precursor;; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" source="Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c).;"
Ig8144_scaffold_1172_7
Palaeococcus pacificus, Palaeococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

4330..5481
DNA (1152bp) protein (384aa)
Glycine betaine/carnitine/choline transport ATP-binding protein Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12YK5_METBU
ABC transporter
ABC transporter {ECO:0000313|EMBL:AIF68448.1}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Palaeococcus.;" source="Palaeococcus pacificus DY20341.;"
Ig8144_scaffold_1172_8
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

5478..6122
DNA (645bp) protein (215aa)
Osmoprotection protein (ProW-2) Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O29282_ARCFU
proW-2; osmoprotection protein (proW-2)
Osmoprotection protein (ProW-2) {ECO:0000313|EMBL:AAB90261.1}; species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM; 9628 / NBRC 100126).;"
Ig8144_scaffold_1172_9
Palaeococcus pacificus, Palaeococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

6122..6733
DNA (612bp) protein (204aa)
ABC proline/glycine betaine transporter, inner membrane subunit Tax=Methanosarcina mazei RepID=M1P5S2_METMZ
Osmoprotection protein (proW-1)
Osmoprotection protein (ProW-1) {ECO:0000313|EMBL:AIF69526.1}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Palaeococcus.;" source="Palaeococcus pacificus DY20341.;"
Ig8144_scaffold_1172_10
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6763..7962)
DNA (1200bp) protein (400aa)
Serine/threonine protein kinase Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FRY2_METHJ
serine/threonine proteine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ABD42364.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig8144_scaffold_1172_11
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7980..8339)
DNA (360bp) protein (120aa)
FHA domain containing protein Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FRY5_METHJ
FHA domain-containing protein
FHA domain containing protein {ECO:0000313|EMBL:ABD42363.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig8144_scaffold_1172_12
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8374..8766)
DNA (393bp) protein (131aa)
FHA domain containing protein Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FRY5_METHJ
FHA domain-containing protein
FHA domain containing protein {ECO:0000313|EMBL:ABD42363.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig8144_scaffold_1172_13
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8911..9174
DNA (264bp) protein (88aa)
Uncharacterized protein Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FTB6_METHJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD42362.1}; Flags: Precursor;; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig8144_scaffold_1172_14
unknown

Not on your lists

comp(9233..9595)
DNA (363bp) protein (121aa)

This feature has no annotations

Ig8144_scaffold_1172_15
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9716..12178)
DNA (2463bp) protein (821aa)
PAS domain S-box Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HD33_METFS
PAS domain S-box
PAS domain S-box {ECO:0000313|EMBL:AGB01213.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
Ig8144_scaffold_1172_16
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12367..13131)
DNA (765bp) protein (255aa)
Uncharacterized protein Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XP91_METZD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH61389.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosalsum.;" source="Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5); (Methanohalophilus zhilinae).;"
Ig8144_scaffold_1172_17
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(13230..13538)
DNA (309bp) protein (103aa)
Uncharacterized protein Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HVI8_CYAP4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL46300.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
Ig8144_scaffold_1172_18
Desulfovibrio alaskensis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13612..14760
DNA (1149bp) protein (383aa)
Uncharacterized protein Tax=Desulfovibrio desulfuricans (strain G20) RepID=Q30ZB1_DESDG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB38985.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alaskensis (strain G20) (Desulfovibrio desulfuricans; (strain G20)).;"
Ig8144_scaffold_1172_19

Not on your lists

comp(14975..15952)
DNA (978bp) protein (326aa)
hypothetical protein Tax=Geopsychrobacter electrodiphilus RepID=UPI00037CCBC0
Uncharacterized protein {ECO:0000313|EMBL:KKN30307.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ROK family protein
Ig8144_scaffold_1172_20
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

Not on your lists

comp(15963..16616)
DNA (654bp) protein (218aa)
ribulose-phosphate 3-epimerase; K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Tax=RBG_13_Bathyarchaeota_52_12_curated
Ig8144_scaffold_1172_21
RIFOXYA2_FULL_RIF01_40_8_curated, RIF1, Bacteria

Not on your lists

comp(16643..17314)
DNA (672bp) protein (224aa)
Hydrolase Tax=Acetonema longum DSM 6540 RepID=F7NGW6_9FIRM
HAD-superfamily hydrolase
Tax=RIFOXYA2_FULL_RIF01_40_8_curated
Ig8144_scaffold_1172_22
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

comp(17344..18831)
DNA (1488bp) protein (496aa)
Glucose-6-phosphate 1-dehydrogenase Tax=Salinibacter ruber (strain M8) RepID=D5H4P9_SALRM
zwf; glucose-6-phosphate dehydrogenase
Tax=RBG_16_Zixibacteria_53_22_curated
Ig8144_scaffold_1172_23
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(18797..19738)
DNA (942bp) protein (314aa)
6-phosphogluconate dehydrogenase-like protein Tax=mine drainage metagenome RepID=T1CM46_9ZZZZ
6-phosphogluconate dehydrogenase-like protein
Tax=RBG_13_Bathyarchaeota_38_9_curated
Ig8144_scaffold_1172_24

Not on your lists

comp(19717..22524)
DNA (2808bp) protein (936aa)
tal; bifunctional transaldolase/phosoglucose isomerase; K13810 transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9] bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:KKN30308.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
tal; bifunctional transaldolase/phosoglucose isomerase
Ig8144_scaffold_1172_25
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(22528..24540)
DNA (2013bp) protein (671aa)
tkt; transketolase (EC:2.2.1.1)
Transketolase Tax=uncultured Acidobacteria bacterium RepID=H5SG42_9BACT
Transketolase {ECO:0000313|EMBL:BAL55128.1}; species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
Ig8144_scaffold_1172_26
Methanosarcina sp. WWM596, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24816..25451)
DNA (636bp) protein (212aa)
Kynurenine formamidase Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FV9_METBF
Metal-dependent hydrolase {ECO:0000313|EMBL:AKB17752.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WWM596.;"
Metal-dependent hydrolase
Ig8144_scaffold_1172_27
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

25580..27082
DNA (1503bp) protein (501aa)
General substrate transporter Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FQ71_METHJ
general substrate transporter
General substrate transporter {ECO:0000313|EMBL:ABD41364.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig8144_scaffold_1172_28
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

27228..29999
DNA (2772bp) protein (924aa)
Uncharacterized protein Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FPM8_METHJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD40813.1}; Flags: Precursor;; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
Ig8144_scaffold_1172_29
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30207..32738)
DNA (2532bp) protein (844aa)
Periplasmic sensor signal transduction histidine kinase Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FLX2_METHJ
PAS domain-containing protein
PAS domain-containing protein {ECO:0000313|EMBL:BAP55692.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
Displaying 29 items

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