ggKbase home page

Ig8144_scaffold_2748

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig8144_scaffold_2748_trna_1
unknown

Not on your lists

comp(4..89)
DNA (86bp)
transferRNA Ser
Ig8144_scaffold_2748_1
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(252..956)
DNA (705bp) protein (235aa)
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ATT7_9CLOT
Tax=BJP_IG2157_Clostridiales_35_16
Ig8144_scaffold_2748_2
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(990..2021)
DNA (1032bp) protein (344aa)
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase Tax=Clostridium sp. D5 RepID=F0Z546_9CLOT
Tax=BJP_IG2102_Clostridiales_34_350
Ig8144_scaffold_2748_3
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2038..2628)
DNA (591bp) protein (197aa)
Tax=BJP_IG2102_Clostridiales_34_350
Ig8144_scaffold_2748_4
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2673..3599)
DNA (927bp) protein (309aa)
RNAse Z (EC:3.1.26.11)
Ribonuclease Z Tax=Firmicutes bacterium CAG:227 RepID=R6VJR7_9FIRM
Tax=BJP_IG2102_Clostridiales_34_350
Ig8144_scaffold_2748_5
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3720..3992)
DNA (273bp) protein (91aa)
Uncharacterized protein Tax=Clostridium sp. CAG:632 RepID=R5KE64_9CLOT
ribosomal-protein-alanine acetyltransferase
Tax=BJP_IG2102_Clostridiales_34_350
Ig8144_scaffold_2748_6
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4106..6409)
DNA (2304bp) protein (768aa)
Peptidase S16, lon-like protein bin=GWE2_Clostridiales_32_10 species=Clostridium sp. ASF356 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Clostridiales_32_10 organism_group=Clostridiales
putative ATP-dependent protease
Tax=BJP_IG2102_Clostridiales_34_350
Ig8144_scaffold_2748_7
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6540..7259)
DNA (720bp) protein (240aa)
Universal bacterial protein YeaZ Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LIV9_9FIRM
peptidase M22 glycoprotease
Tax=BJP_IG2157_Clostridiales_35_16
Ig8144_scaffold_2748_8
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7274..7708)
DNA (435bp) protein (145aa)
Hydrolase P-loop family Tax=Firmicutes RepID=R6PVS2_9FIRM
hypothetical protein
Tax=BJP_IG2157_Clostridiales_35_16
Ig8144_scaffold_2748_9
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7722..9944)
DNA (2223bp) protein (741aa)
Tex-like protein N-terminal domain protein Tax=Roseburia inulinivorans DSM 16841 RepID=C0FQ20_9FIRM
Transcriptional accessory protein
Tax=BJP_IG2102_Clostridiales_34_350
Ig8144_scaffold_2748_10
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9999..11219)
DNA (1221bp) protein (407aa)
Aspartokinase Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JKT4_CELLD
aspartate kinase
Tax=BJP_IG2157_Clostridiales_35_16
Ig8144_scaffold_2748_11
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11238..12461)
DNA (1224bp) protein (408aa)
homoserine kinase (EC:5.4.2.1)
Proposed homoserine kinase Tax=Clostridium thermocellum RepID=A3DEZ5_CLOTH
Tax=BJP_IG2102_Clostridiales_34_350
Ig8144_scaffold_2748_12
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12473..13708)
DNA (1236bp) protein (412aa)
Homoserine dehydrogenase Tax=Butyrivibrio sp. CAG:318 RepID=R6QQW5_9FIRM
homoserine dehydrogenase
Tax=BJP_IG2102_Clostridiales_34_350
Ig8144_scaffold_2748_13
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13714..14157)
DNA (444bp) protein (148aa)
ACT domain-containing protein (EC:5.4.99.5)
UPF0735 ACT domain-containing protein CC1_16090 Tax=Coprococcus catus GD/7 RepID=D4J7Q3_9FIRM
Tax=BJP_IG2102_Clostridiales_34_350
Ig8144_scaffold_2748_14
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14417..14878)
DNA (462bp) protein (154aa)
Positive regulator of CheA protein activity (CheW) Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AWU3_9CLOT
chemotaxis protein, CheW-like protein
Tax=BJP_IG2157_Clostridiales_35_16
Ig8144_scaffold_2748_15
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14881..15948)
DNA (1068bp) protein (356aa)
Peptide chain release factor 2 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JS29_CELLD
peptide chain release factor 2
Tax=BJP_IG2102_Clostridiales_34_350
Ig8144_scaffold_2748_16
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16070..16882)
DNA (813bp) protein (271aa)
Protein translocase subunit SecA Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=SECA_CLOPH
Preprotein translocase subunit SecA
Tax=BJP_IG2102_Clostridiales_34_350
Displaying 17 items

View Taxonomy